RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 GDI1P31150 447 aa20.73■□□□□ 0.91
NPAS3-206ENST00000548645 BIKQ13323 160 aa20.73■□□□□ 0.91
NPAS3-206ENST00000548645 EIF2B1Q14232 305 aaKnown RBP20.73■□□□□ 0.91
NPAS3-206ENST00000548645 MED25Q71SY5 747 aa20.73■□□□□ 0.91
NPAS3-206ENST00000548645 C12orf76Q8N812 135 aaPredicted RBP20.73■□□□□ 0.91
NPAS3-206ENST00000548645 HRH4Q9H3N8 390 aa20.73■□□□□ 0.91
NPAS3-206ENST00000548645 HRASLS2Q9NWW9 162 aa20.73■□□□□ 0.91
NPAS3-206ENST00000548645 LHX6Q9UPM6 363 aa20.73■□□□□ 0.91
NPAS3-206ENST00000548645 FANCMQ8IYD8 2048 aa20.73■□□□□ 0.91
NPAS3-206ENST00000548645 PTPRSQ13332 1948 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 PRSS37A4D1T9 235 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 SLC16A7O60669 478 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 APODP05090 189 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 CAV2P51636 162 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 ZNF585AQ6P3V2 769 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 OR4D6Q8NGJ1 314 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 NANPQ8TBE9 248 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 CPNE2Q96FN4 548 aaPredicted RBP20.72■□□□□ 0.91
NPAS3-206ENST00000548645 ABHD6Q9BV23 337 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 RNF122Q9H9V4 155 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 COLCA2A8K830 154 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 OR2T1O43869 369 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 NAT2P11245 290 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 TBPP20226 339 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 FUT7Q11130 342 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 FAM109BQ6ICB4 259 aaPredicted RBP20.72■□□□□ 0.91
NPAS3-206ENST00000548645 TMEM200AQ86VY9 491 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 NUDCD2Q8WVJ2 157 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 S1PR5Q9H228 398 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 PRTFDC1Q9NRG1 225 aa20.72■□□□□ 0.91
NPAS3-206ENST00000548645 WIPF3A6NGB9 483 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 POU2F2P09086 479 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 MUC1P15941 1255 aaPredicted RBP20.71■□□□□ 0.91
NPAS3-206ENST00000548645 SLC6A9P48067 706 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 SNRPEP62304 92 aaKnown RBP20.71■□□□□ 0.91
NPAS3-206ENST00000548645 IGLV3-21P80748 117 aaPredicted RBP20.71■□□□□ 0.91
NPAS3-206ENST00000548645 SGCEO43556 437 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 SGCAQ16586 387 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 SLC22A6Q4U2R8 563 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 MISPQ8IVT2 679 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 LINC00469Q8N7U9 141 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 ELSPBP1Q96BH3 223 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 MICU1Q9BPX6 476 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 SMCO4Q9NRQ5 59 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 WIF1Q9Y5W5 379 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 A0A0A6YYC8 382 aaPredicted RBP20.71■□□□□ 0.91
NPAS3-206ENST00000548645 I3L1I5 382 aaPredicted RBP20.71■□□□□ 0.91
NPAS3-206ENST00000548645 HCRTR1O43613 425 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 SMAD2Q15796 467 aaKnown RBP20.71■□□□□ 0.91
NPAS3-206ENST00000548645 DTWD2Q8NBA8 298 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 OR6S1Q8NH40 331 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 OIT3Q8WWZ8 545 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 CMBLQ96DG6 245 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 SLC22A11Q9NSA0 550 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 PRODH2Q9UF12 536 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 R4GMQ9 66 aa20.71■□□□□ 0.91
NPAS3-206ENST00000548645 LOC107986453A0A1B0GWG9 222 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 H0YIZ8 118 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 CLDN4O14493 209 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 TIMP1P01033 207 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 HABP2Q14520 560 aaPredicted RBP20.7■□□□□ 0.9
NPAS3-206ENST00000548645 C1orf53Q5VUE5 145 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 MDGA2Q7Z553 956 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 ZNF524Q96C55 264 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 EMC9Q9Y3B6 208 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 IGLV1-36A0A0B4J1U3 117 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 LINC00587B1AMM8 73 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 RNASEK-C17orf49H0YIS7 233 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 PLGP00747 810 aaPredicted RBP20.7■□□□□ 0.9
NPAS3-206ENST00000548645 BGLAPP02818 100 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 FABP1P07148 127 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 ZNF806P0C7X5 589 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 RPL27P61353 136 aaKnown RBP20.7■□□□□ 0.9
NPAS3-206ENST00000548645 ECH1Q13011 328 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 ZNF615Q8N8J6 731 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 OR52N5Q8NH56 324 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 ADAMTS17Q8TE56 1095 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 SMIM8Q96KF7 97 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 SEC61A2Q9H9S3 476 aa20.7■□□□□ 0.9
NPAS3-206ENST00000548645 H0Y8X5 98 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 SFTA3P0C7M3 94 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 PAX6P26367 422 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 POLR2GP62487 172 aaKnown RBP eCLIP20.69■□□□□ 0.9
NPAS3-206ENST00000548645 BTG2P78543 158 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 ACKR1Q16570 336 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 DEFB110Q30KQ9 67 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 LYPD6Q86Y78 171 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 MARCH1Q8TCQ1 289 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 ADAM19Q9H013 955 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 C1orf196B1AJZ1 125 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 PRKNO60260 465 aaPredicted RBP20.69■□□□□ 0.9
NPAS3-206ENST00000548645 CXCR1P25024 350 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 PTAFRP25105 342 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 INSM1Q01101 510 aaPredicted RBP20.69■□□□□ 0.9
NPAS3-206ENST00000548645 ERV3-1Q14264 604 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 SMCO1Q147U7 214 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 TMEM128Q5BJH2 165 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 PRSS54Q6PEW0 395 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 TMPPEQ6ZT21 453 aa20.69■□□□□ 0.9
NPAS3-206ENST00000548645 OOSP2Q86WS3 158 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms