RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 ABHD12BQ7Z5M8 362 aaPredicted RBP2.58□□□□□ -2
VPS29-205ENST00000548539 ZNF547Q8IVP9 402 aa2.58□□□□□ -2
VPS29-205ENST00000548539 FAM71AQ8IYT1 594 aa2.58□□□□□ -2
VPS29-205ENST00000548539 PGAM4Q8N0Y7 254 aa2.58□□□□□ -2
VPS29-205ENST00000548539 CBR4Q8N4T8 237 aa2.58□□□□□ -2
VPS29-205ENST00000548539 ARRDC1Q8N5I2 433 aa2.58□□□□□ -2
VPS29-205ENST00000548539 CHST4Q8NCG5 386 aa2.58□□□□□ -2
VPS29-205ENST00000548539 NOXO1Q8NFA2 376 aa2.58□□□□□ -2
VPS29-205ENST00000548539 OR10G2Q8NGC3 310 aa2.58□□□□□ -2
VPS29-205ENST00000548539 GPX8Q8TED1 209 aa2.58□□□□□ -2
VPS29-205ENST00000548539 ABHD3Q8WU67 409 aa2.58□□□□□ -2
VPS29-205ENST00000548539 NTAN1Q96AB6 310 aa2.58□□□□□ -2
VPS29-205ENST00000548539 MRGPRFQ96AM1 343 aa2.58□□□□□ -2
VPS29-205ENST00000548539 KIAA1143Q96AT1 154 aaPredicted RBP2.58□□□□□ -2
VPS29-205ENST00000548539 PDXPQ96GD0 296 aa2.58□□□□□ -2
VPS29-205ENST00000548539 ZNF681Q96N22 645 aa2.58□□□□□ -2
VPS29-205ENST00000548539 FOXC2Q99958 501 aa2.58□□□□□ -2
VPS29-205ENST00000548539 C8orf33Q9H7E9 229 aaPredicted RBP2.58□□□□□ -2
VPS29-205ENST00000548539 C12orf10Q9HB07 376 aa2.58□□□□□ -2
VPS29-205ENST00000548539 WFDC1Q9HC57 220 aa2.58□□□□□ -2
VPS29-205ENST00000548539 CTSFQ9UBX1 484 aa2.58□□□□□ -2
VPS29-205ENST00000548539 MTFP1Q9UDX5 166 aa2.58□□□□□ -2
VPS29-205ENST00000548539 PSG11Q9UQ72 335 aa2.58□□□□□ -2
VPS29-205ENST00000548539 MROH7-TTC4A0A0A0MT08 1334 aa2.58□□□□□ -2
VPS29-205ENST00000548539 MTCL1Q9Y4B5 1905 aaKnown RBP2.58□□□□□ -2
VPS29-205ENST00000548539 H7C0C1 242 aa2.57□□□□□ -2
VPS29-205ENST00000548539 PLPP1O14494 284 aa2.57□□□□□ -2
VPS29-205ENST00000548539 AQP8O94778 261 aa2.57□□□□□ -2
VPS29-205ENST00000548539 SCELO95171 688 aa2.57□□□□□ -2
VPS29-205ENST00000548539 ERGP11308 486 aa2.57□□□□□ -2
VPS29-205ENST00000548539 ATF6P18850 670 aa2.57□□□□□ -2
VPS29-205ENST00000548539 IL32P24001 234 aa2.57□□□□□ -2
VPS29-205ENST00000548539 HCAR3P49019 387 aa2.57□□□□□ -2
VPS29-205ENST00000548539 SERPINB8P50452 374 aa2.57□□□□□ -2
VPS29-205ENST00000548539 P2RX1P51575 399 aa2.57□□□□□ -2
VPS29-205ENST00000548539 CDKN2DP55273 166 aa2.57□□□□□ -2
VPS29-205ENST00000548539 CLDN8P56748 225 aa2.57□□□□□ -2
VPS29-205ENST00000548539 ARG2P78540 354 aa2.57□□□□□ -2
VPS29-205ENST00000548539 RAD51Q06609 339 aa2.57□□□□□ -2
VPS29-205ENST00000548539 IFT88Q13099 833 aa2.57□□□□□ -2
VPS29-205ENST00000548539 DGCR6Q14129 220 aa2.57□□□□□ -2
VPS29-205ENST00000548539 DOC2AQ14183 400 aa2.57□□□□□ -2
VPS29-205ENST00000548539 QPRTQ15274 297 aa2.57□□□□□ -2
VPS29-205ENST00000548539 PRMT9Q6P2P2 845 aa2.57□□□□□ -2
VPS29-205ENST00000548539 RIMKLAQ8IXN7 391 aa2.57□□□□□ -2
VPS29-205ENST00000548539 NPWQ8N729 165 aa2.57□□□□□ -2
VPS29-205ENST00000548539 C8orf31Q8N9H6 132 aa2.57□□□□□ -2
VPS29-205ENST00000548539 LRRC75AQ8NAA5 344 aa2.57□□□□□ -2
VPS29-205ENST00000548539 GLYATL2Q8WU03 294 aa2.57□□□□□ -2
VPS29-205ENST00000548539 ISG20Q96AZ6 181 aaKnown RBP2.57□□□□□ -2
VPS29-205ENST00000548539 APH1AQ96BI3 265 aa2.57□□□□□ -2
VPS29-205ENST00000548539 ZNF707Q96C28 371 aaPredicted RBP2.57□□□□□ -2
VPS29-205ENST00000548539 RBMXL1Q96E39 390 aaKnown RBP2.57□□□□□ -2
VPS29-205ENST00000548539 GALNT14Q96FL9 552 aa2.57□□□□□ -2
VPS29-205ENST00000548539 PARP12Q9H0J9 701 aaKnown RBP2.57□□□□□ -2
VPS29-205ENST00000548539 SAV1Q9H4B6 383 aaPredicted RBP2.57□□□□□ -2
VPS29-205ENST00000548539 SYNDIG1Q9H7V2 258 aa2.57□□□□□ -2
VPS29-205ENST00000548539 CLN6Q9NWW5 311 aa2.57□□□□□ -2
VPS29-205ENST00000548539 SLC39A1Q9NY26 324 aa2.57□□□□□ -2
VPS29-205ENST00000548539 RHBDD3Q9Y3P4 386 aa2.57□□□□□ -2
VPS29-205ENST00000548539 CARMIL3Q8ND23 1372 aa2.57□□□□□ -2
VPS29-205ENST00000548539 IGHV5-10-1A0A0J9YXX1 117 aa2.56□□□□□ -2
VPS29-205ENST00000548539 TSPAN11A1L157 253 aa2.56□□□□□ -2
VPS29-205ENST00000548539 OR6C74A6NCV1 312 aa2.56□□□□□ -2
VPS29-205ENST00000548539 NME4O00746 187 aa2.56□□□□□ -2
VPS29-205ENST00000548539 RAB3AP20336 220 aa2.56□□□□□ -2
VPS29-205ENST00000548539 SSTR5P35346 364 aa2.56□□□□□ -2
VPS29-205ENST00000548539 OR1G1P47890 313 aa2.56□□□□□ -2
VPS29-205ENST00000548539 BCAP31P51572 246 aa2.56□□□□□ -2
VPS29-205ENST00000548539 RPS23P62266 143 aaKnown RBP2.56□□□□□ -2
VPS29-205ENST00000548539 RAB11AP62491 216 aa2.56□□□□□ -2
VPS29-205ENST00000548539 ART3Q13508 389 aa2.56□□□□□ -2
VPS29-205ENST00000548539 WDR43Q15061 677 aaKnown RBP eCLIP2.56□□□□□ -2
VPS29-205ENST00000548539 STK11Q15831 433 aa2.56□□□□□ -2
VPS29-205ENST00000548539 RAB11BQ15907 218 aa2.56□□□□□ -2
VPS29-205ENST00000548539 ORMDL2Q53FV1 153 aa2.56□□□□□ -2
VPS29-205ENST00000548539 BEX5Q5H9J7 111 aa2.56□□□□□ -2
VPS29-205ENST00000548539 STUMQ69YW2 141 aa2.56□□□□□ -2
VPS29-205ENST00000548539 NPSR1Q6W5P4 371 aa2.56□□□□□ -2
VPS29-205ENST00000548539 Q6ZR03 302 aa2.56□□□□□ -2
VPS29-205ENST00000548539 COX18Q8N8Q8 333 aa2.56□□□□□ -2
VPS29-205ENST00000548539 C15orf56Q8N910 161 aa2.56□□□□□ -2
VPS29-205ENST00000548539 FAM184AQ8NB25 1140 aa2.56□□□□□ -2
VPS29-205ENST00000548539 GPR26Q8NDV2 337 aa2.56□□□□□ -2
VPS29-205ENST00000548539 OR51F2Q8NH61 342 aa2.56□□□□□ -2
VPS29-205ENST00000548539 PIFOQ8TCI5 191 aa2.56□□□□□ -2
VPS29-205ENST00000548539 SEH1LQ96EE3 360 aa2.56□□□□□ -2
VPS29-205ENST00000548539 JSRP1Q96MG2 331 aaPredicted RBP2.56□□□□□ -2
VPS29-205ENST00000548539 TIMM17AQ99595 171 aa2.56□□□□□ -2
VPS29-205ENST00000548539 UQCC2Q9BRT2 126 aa2.56□□□□□ -2
VPS29-205ENST00000548539 RPP21Q9H633 154 aaKnown RBP2.56□□□□□ -2
VPS29-205ENST00000548539 CYP3A43Q9HB55 503 aa2.56□□□□□ -2
VPS29-205ENST00000548539 CHRAC1Q9NRG0 131 aa2.56□□□□□ -2
VPS29-205ENST00000548539 RAB26Q9ULW5 256 aa2.56□□□□□ -2
VPS29-205ENST00000548539 YARS2Q9Y2Z4 477 aaKnown RBP2.56□□□□□ -2
VPS29-205ENST00000548539 MROH7Q68CQ1 1323 aa2.56□□□□□ -2
VPS29-205ENST00000548539 TMEM120BA0PK00 339 aa2.55□□□□□ -2
VPS29-205ENST00000548539 SYCE1LA8MT33 242 aa2.55□□□□□ -2
VPS29-205ENST00000548539 H0YC42 278 aa2.55□□□□□ -2
VPS29-205ENST00000548539 ZBTB5O15062 677 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms