RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CT45A7P0DMV0 189 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 CXCR2P25025 360 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 IVDP26440 423 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 HTR2CP28335 458 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 PCK1P35558 622 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 ARR3P36575 388 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 BTDP43251 543 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 KIR2DS4P43632 304 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 SKP1P63208 163 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF92Q03936 586 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 BCL2L1Q07817 233 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 CD300CQ08708 224 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 TWF1Q12792 350 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 PDIA2Q13087 525 aaKnown RBP3.29□□□□□ -1.88
SCAF11-210ENST00000547654 ATP6AP1Q15904 470 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 NRF1Q16656 503 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 CT45A1Q5HYN5 189 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 C1orf94Q6P1W5 598 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 CNIH2Q6PI25 160 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 C2orf66Q6UXQ4 117 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF621Q6ZSS3 439 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 PEX26Q7Z412 305 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 TMEM150AQ86TG1 271 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 VKORC1L1Q8N0U8 176 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 SYS1Q8N2H4 156 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF740Q8NDX6 193 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 OR10G3Q8NGC4 313 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 CT45A3Q8NHU0 189 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 ITFG1Q8TB96 612 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 AGAP11Q8TF27 550 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 TFGQ92734 400 aaPredicted RBP3.29□□□□□ -1.88
SCAF11-210ENST00000547654 EEF1AKMT3Q96AZ1 226 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 DNAJC1Q96KC8 554 aaKnown RBP3.29□□□□□ -1.88
SCAF11-210ENST00000547654 MED10Q9BTT4 135 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 RNF126Q9BV68 326 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 NAA50Q9GZZ1 169 aaKnown RBP3.29□□□□□ -1.88
SCAF11-210ENST00000547654 OR51J1Q9H342 316 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 ARMC7Q9H6L4 198 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 MRM3Q9HC36 420 aaKnown RBP3.29□□□□□ -1.88
SCAF11-210ENST00000547654 CD209Q9NNX6 404 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 CTPS2Q9NRF8 586 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.29□□□□□ -1.88
SCAF11-210ENST00000547654 MTRF1LQ9UGC7 380 aaKnown RBP3.29□□□□□ -1.88
SCAF11-210ENST00000547654 ATP6V1DQ9Y5K8 247 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 FLVCR1Q9Y5Y0 555 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 BCL9O00512 1426 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 A0A0B4J2A0 478 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 MGAT4DA6NG13 374 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 AGPAT2O15120 278 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 RAD51CO43502 376 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 ICOSLGO75144 302 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 ARG1P05089 322 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 SLC35E2P0CK97 266 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 PGAM2P15259 253 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF250P15622 560 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 GPR6P46095 362 aaPredicted RBP3.28□□□□□ -1.88
SCAF11-210ENST00000547654 RORCP51449 518 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 CCR8P51685 355 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 CLINT1Q14677 625 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 KCTD19Q17RG1 926 aaPredicted RBP3.28□□□□□ -1.88
SCAF11-210ENST00000547654 LRRC36Q1X8D7 754 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 VAX1Q5SQQ9 334 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF600Q6ZNG1 722 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 UNC93AQ86WB7 457 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 SELENOHQ8IZQ5 122 aaKnown RBP3.28□□□□□ -1.88
SCAF11-210ENST00000547654 NOXO1Q8NFA2 376 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 OR6K6Q8NGW6 343 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 OR6N2Q8NGY6 317 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 OR51F2Q8NH61 342 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 SDR42E1Q8WUS8 393 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 TMEM239Q8WW34 195 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 ACOT11Q8WXI4 607 aaPredicted RBP3.28□□□□□ -1.88
SCAF11-210ENST00000547654 BAALCQ8WXS3 180 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 CHCHD10Q8WYQ3 142 aaPredicted RBP3.28□□□□□ -1.88
SCAF11-210ENST00000547654 CDKL2Q92772 493 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 FRAT1Q92837 279 aaPredicted RBP3.28□□□□□ -1.88
SCAF11-210ENST00000547654 PIK3IP1Q96FE7 263 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 OPRPNQ99935 248 aaPredicted RBP3.28□□□□□ -1.88
SCAF11-210ENST00000547654 HDHD2Q9H0R4 259 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 PANK3Q9H999 370 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 PLGRKTQ9HBL7 147 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 CALYQ9NYX4 217 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 STMN3Q9NZ72 180 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 DHRS4-AS1Q9P1J3 65 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 SHPKQ9UHJ6 478 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 BTNL2Q9UIR0 455 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 CLTCL1P53675 1640 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 TAF1LQ8IZX4 1826 aa3.28□□□□□ -1.88
SCAF11-210ENST00000547654 KIF15Q9NS87 1388 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 DICER1Q9UPY3 1922 aaKnown RBP3.27□□□□□ -1.89
SCAF11-210ENST00000547654 A0A1W2PQ72 361 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 PSMB11A5LHX3 300 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 H3BN98 237 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 HCRTR1O43613 425 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 CBR3O75828 277 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 DUSP14O95147 198 aaKnown RBP3.27□□□□□ -1.89
SCAF11-210ENST00000547654 LCA5LO95447 670 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 TDP2O95551 362 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 FADS2O95864 444 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms