RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 LRP12Q9Y561 859 aa13.82□□□□□ -0.2
TRAFD1-203ENST00000547063 FAM90A27PA6NNH2 459 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 SYNGR3O43761 229 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 CLDN14O95500 239 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 ABHD16AO95870 558 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 LCKP06239 509 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 PATE4P0C8F1 98 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 CBR1P16152 277 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 PSMB9P28065 219 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 TTKP33981 857 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 HTR5AP47898 357 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 TGM4P49221 684 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 MLLT11Q13015 90 aaPredicted RBP13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 TSC22D1Q15714 1073 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 TIGD6Q17RP2 521 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 SYT6Q5T7P8 510 aaPredicted RBP13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 LIPNQ5VXI9 398 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 ZNF774Q6NX45 483 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 SPATC1Q76KD6 591 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 KLBQ86Z14 1044 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 WDR31Q8NA23 367 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 OR1J2Q8NGS2 313 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 FGFBP3Q8TAT2 258 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 MUL1Q969V5 352 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 S100PBPQ96BU1 408 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 PELI1Q96FA3 418 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 OR5M11Q96RB7 305 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 DCLRE1CQ96SD1 692 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 KCNJ15Q99712 375 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 ISG20L2Q9H9L3 353 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 KALRNO60229 2985 aa13.81□□□□□ -0.2
TRAFD1-203ENST00000547063 DIDO1Q9BTC0 2240 aaKnown RBP13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 HIVEP3Q5T1R4 2406 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 ACOD1A6NK06 481 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 PRR32B1ATL7 298 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 PSMD9O00233 223 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 SERPINA5P05154 406 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 HSMCR30P0CW71 290 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 APLNRP35414 380 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 PEX19P40855 299 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 MMP16P51512 607 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 TPTEP56180 551 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 SORDQ00796 357 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 GPR50Q13585 617 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 PPA1Q15181 289 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 C3orf36Q3SXR2 165 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 FDX2Q6P4F2 183 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 RPL22L1Q6P5R6 122 aaKnown RBP13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 MDP1Q86V88 176 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 AKR7LQ8NHP1 331 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 MOB1AQ9H8S9 216 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 ACOXLQ9NUZ1 547 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 SLC25A15Q9Y619 301 aa13.8□□□□□ -0.2
TRAFD1-203ENST00000547063 CFAP46Q8IYW2 2715 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 ZG16O60844 167 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 RPP14O95059 124 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 TFAP2AP05549 437 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 CRYGSP22914 178 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 STOMP27105 288 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 OTX1P32242 354 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 GDI2P50395 445 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 CCR9P51686 369 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 PSMA6P60900 246 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 TUBA1BP68363 451 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 GALK2Q01415 458 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 BLMHQ13867 455 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 RAB39AQ14964 217 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 TBC1D28Q2M2D7 210 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 ARMCX4Q5H9R4 360 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 ARL9Q6T311 187 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 DRAM2Q6UX65 266 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 TUBA1AQ71U36 451 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 ZNF283Q8N7M2 679 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 IL17RDQ8NFM7 739 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 ITLN2Q8WWU7 325 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 UFD1Q92890 307 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 NGBQ9NPG2 151 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 CRNNQ9UBG3 495 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 NDRG3Q9UGV2 375 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 R4GMQ9 66 aa13.79□□□□□ -0.2
TRAFD1-203ENST00000547063 TMEM269A0A1B0GVZ9 245 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 NKX2-6A6NCS4 301 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 ZNF503-AS2A6NEH8 195 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 F5H5K5 113 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 LOC110117498-PIK3R3F6TDL0 507 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 M0R135 149 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 MAGEB4O15481 346 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 INMTO95050 263 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 IGKV3-15P01624 115 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 CD1AP06126 327 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 ZNF14P17017 642 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 CD53P19397 219 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 APEX1P27695 318 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 ALDH3B2P48448 385 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 CX3CR1P49238 355 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 RGS6P49758 472 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 PRKXP51817 358 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 TPBGQ13641 420 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 TAB1Q15750 504 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 GPR141Q7Z602 305 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms