RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 CDC20BQ86Y33 519 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 CLVS1Q8IUQ0 354 aaPredicted RBP7.45□□□□□ -1.22
VPS29-203ENST00000546588 WDFY1Q8IWB7 410 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 UEVLDQ8IX04 471 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 MCEMP1Q8IX19 187 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 TMEM123Q8N131 208 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 ACBD7Q8N6N7 88 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 ZIC4Q8N9L1 334 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 ZNF680Q8NEM1 530 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 NOXO1Q8NFA2 376 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 OR5M1Q8NGP8 315 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 ANGPTL6Q8NI99 470 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 RAB2BQ8WUD1 216 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 SNX33Q8WV41 574 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 RORBQ92753 470 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 TMEM54Q969K7 222 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 DACH2Q96NX9 599 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 OPALINQ96PE5 141 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 DHRS9Q9BPW9 319 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 KRTAP9-3Q9BYQ3 159 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 OR10A4Q9H209 315 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 SPACA1Q9HBV2 294 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 TIGARQ9NQ88 270 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 NDUFB11Q9NX14 153 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 KLHL9Q9P2J3 617 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 ENPP5Q9UJA9 477 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 B9D1Q9UPM9 204 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 GAB2Q9UQC2 676 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 ERGIC3Q9Y282 383 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 FLVCR1Q9Y5Y0 555 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 DMXL2Q8TDJ6 3036 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 TMEM8BA6NDV4 472 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 A6NL46 340 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 ZNF724A8MTY0 619 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 NPIPA5E9PKD4 350 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 TNFSF11O14788 317 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 PHYHO14832 338 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 RRP8O43159 456 aaKnown RBP7.44□□□□□ -1.22
VPS29-203ENST00000546588 AKAP8O43823 692 aaKnown RBP7.44□□□□□ -1.22
VPS29-203ENST00000546588 TRMUO75648 421 aaKnown RBP7.44□□□□□ -1.22
VPS29-203ENST00000546588 AQP8O94778 261 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 F10P00742 488 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 IGHG1P01857 330 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 LCKP06239 509 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 CTLA4P16410 223 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 MYL12AP19105 171 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 SFTPDP35247 375 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 OR2B6P58173 313 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 ACTA2P62736 377 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 PPIAP62937 165 aaKnown RBP7.44□□□□□ -1.22
VPS29-203ENST00000546588 ACTG2P63267 376 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 ZNF85Q03923 595 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 SLC10A1Q14973 349 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 GUSBP1Q15486 140 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 SPHARQ15513 63 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 CTF1Q16619 201 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 KHDC1LQ5JSQ8 128 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 PDSS1Q5T2R2 415 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 C1orf185Q5T7R7 199 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 ZNF324BQ6AW86 544 aaPredicted RBP7.44□□□□□ -1.22
VPS29-203ENST00000546588 HBMQ6B0K9 141 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 SLC25A47Q6Q0C1 308 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 ZNF627Q7L945 461 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 PM20D2Q8IYS1 436 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 ZADH2Q8N4Q0 377 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 RBMXL3Q8N7X1 1067 aaKnown RBP7.44□□□□□ -1.22
VPS29-203ENST00000546588 CYB561A3Q8NBI2 242 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 SLC26A10Q8NG04 563 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 OR4F15Q8NGB8 312 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 OR9K2Q8NGE7 335 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 OR10Z1Q8NGY1 313 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 OR10D3Q8NH80 312 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 OR5M11Q96RB7 305 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 DMRTA2Q96SC8 542 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 MGLLQ99685 303 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 LINC00470Q9BZP3 86 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 NUAK2Q9H093 628 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 SYT4Q9H2B2 425 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 GHITMQ9H3K2 345 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 TMEM185BQ9H7F4 350 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 MED20Q9H944 212 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 MRPL22Q9NWU5 206 aaKnown RBP7.44□□□□□ -1.22
VPS29-203ENST00000546588 TAS2R16Q9NYV7 291 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 RSL24D1Q9UHA3 163 aaKnown RBP7.44□□□□□ -1.22
VPS29-203ENST00000546588 CLEC2DQ9UHP7 191 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 KCNG2Q9UJ96 466 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 NPIPA1Q9UND3 350 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 ZNF175Q9Y473 711 aa7.44□□□□□ -1.22
VPS29-203ENST00000546588 CACNA1AO00555 2505 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 PTPRZ1P23471 2315 aaPredicted RBP7.43□□□□□ -1.22
VPS29-203ENST00000546588 A0A087X0M5 115 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 TRGV5A0A0B4J1U4 118 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 A0A1B0GX30 115 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 C12orf71A8MTZ7 269 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 B8ZZF3 427 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 C11orf98E9PRG8 122 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 MKRN2OSH3BPM6 223 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 RPL36A-HNRNPH2H7BZ11 118 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 CCRL2O00421 344 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 MYL12BO14950 172 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms