RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ARHGAP40Q5TG30 622 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 MTFR2Q6P444 385 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 PAPD4Q6PIY7 484 aaKnown RBP5.8□□□□□ -1.48
SNHG1-225ENST00000545920 OGFOD3Q6PK18 319 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 NHLRC1Q6VVB1 395 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF813Q6ZN06 617 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 RAB11FIP2Q7L804 512 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 DPY19L4Q7Z388 723 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 SFTPA1Q8IWL2 248 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 SKA3Q8IX90 412 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 BPIFB2Q8N4F0 458 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ARRDC1Q8N5I2 433 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 BMPERQ8N8U9 685 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF248Q8NDW4 579 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 SLC30A7Q8NEW0 376 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 OR5T3Q8NGG3 340 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 OR9A4Q8NGU2 314 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 OR4C3Q8NH37 302 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 OR52N5Q8NH56 324 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF563Q8TA94 476 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 PHOSPHO1Q8TCT1 267 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ZPLD1Q8TCW7 415 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 DUSP19Q8WTR2 217 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ZNRF4Q8WWF5 429 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ASB5Q8WWX0 329 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 METTL21AQ8WXB1 218 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 TMEM234Q8WY98 164 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ARL11Q969Q4 196 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 C8orf44Q96CB5 159 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 MEGF10Q96KG7 1140 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 PDCD10Q9BUL8 212 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 NKX6-2Q9C056 277 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-225ENST00000545920 RAB33BQ9H082 229 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 DUSP15Q9H1R2 295 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-225ENST00000545920 BARX1Q9HBU1 254 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-225ENST00000545920 TMEM100Q9NV29 134 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 SLC39A1Q9NY26 324 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 LRIT1Q9P2V4 623 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 DNAJB11Q9UBS4 358 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF346Q9UL40 294 aaKnown RBP5.8□□□□□ -1.48
SNHG1-225ENST00000545920 ANAPC10Q9UM13 185 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 KLHDC2Q9Y2U9 406 aa5.8□□□□□ -1.48
SNHG1-225ENST00000545920 CARHSP1Q9Y2V2 147 aaKnown RBP5.8□□□□□ -1.48
SNHG1-225ENST00000545920 MRPS2Q9Y399 296 aaKnown RBP5.8□□□□□ -1.48
SNHG1-225ENST00000545920 NUP210LQ5VU65 1888 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 A0A1W2PQF6 199 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 PQLC2LA1A4F0 135 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 TMEM218A2RU14 115 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 PRR33A8MZF0 331 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 IDSB3KWA1 339 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 TMEM150CB9EJG8 249 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 DNASE2O00115 360 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 HCRTR1O43613 425 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 NPIPB7O75200 414 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 CA11O75493 328 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 AHSA1O95433 338 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 PLGP00747 810 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 APOC3P02656 99 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 RLN2P04090 185 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 AMY2AP04746 511 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 IFNA4P05014 189 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 FCER2P06734 321 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 ITGA5P08648 1049 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 FAM87AP0C7U9 286 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 PTNP21246 168 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 FKBP2P26885 142 aaKnown RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 GDI1P31150 447 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 DLSTP36957 453 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 WASP42768 502 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 FASLGP48023 281 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SLC6A9P48067 706 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 CSNK1EP49674 416 aaKnown RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 PNLIPRP2P54317 469 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SLC37A1P57057 533 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 RPS15P62841 145 aaKnown RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 PPIAP62937 165 aaKnown RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 MC2RQ01718 297 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 EGR4Q05215 589 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SCRN3Q0VDG4 424 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 DBPQ10586 325 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SURF2Q15527 256 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 HMGN3Q15651 99 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 ELAVL1Q15717 326 aaKnown RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 INPP5JQ15735 1006 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 ETFDHQ16134 617 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 MEP1BQ16820 701 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 NKPD1Q17RQ9 610 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 TMEM177Q53S58 311 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 VAX1Q5SQQ9 334 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 PRAMEF17Q5VTA0 474 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 ELP2Q6IA86 826 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 PRSS41Q7RTY9 318 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 GRINAQ7Z429 371 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 LYPD6Q86Y78 171 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 LINC00518Q8N0U6 118 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 KDM8Q8N371 416 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SLC22A24Q8N4F4 322 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 COMMD1Q8N668 190 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 ADPRHL1Q8NDY3 354 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms