RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 RAB40AQ8WXH6 277 aa6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 RNF166Q96A37 237 aaPredicted RBP6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 GPR137Q96N19 417 aa6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 WACQ9BTA9 647 aa6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 SF3B5Q9BWJ5 86 aaKnown RBP6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 ACTR6Q9GZN1 396 aa6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 COMMD4Q9H0A8 199 aa6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 HDHD2Q9H0R4 259 aa6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 WDR76Q9H967 626 aa6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 MRPL22Q9NWU5 206 aaKnown RBP6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 ING3Q9NXR8 418 aa6.19□□□□□ -1.42
HMGCS2-204ENST00000544913 NCOA6Q14686 2063 aaPredicted RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 A0A0G2JK05 382 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 A6NIZ1 184 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 TMEM212A6NML5 194 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 FAM171A2A8MVW0 826 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 NCR1O76036 304 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 VAMP5O95183 116 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 ECDO95905 644 aaPredicted RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 YES1P07947 543 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 CALCBP10092 127 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 CRABP1P29762 137 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 NAA10P41227 235 aaPredicted RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 SELENOPP49908 381 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 DAP3P51398 398 aaKnown RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 CCR9P51686 369 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 AP3S2P59780 193 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 RAP1BP61224 184 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 RPS11P62280 158 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 RAP1AP62834 184 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 DYRK1AQ13627 763 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 ALKBH1Q13686 389 aaKnown RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 P2RY14Q15391 338 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 Q499Y3 187 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 ACSF3Q4G176 576 aaPredicted RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 UBE2NLQ5JXB2 153 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 THOC7Q6I9Y2 204 aaKnown RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 RTL6Q6ICC9 239 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 FDX2Q6P4F2 183 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 KCTD18Q6PI47 426 aaPredicted RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 SPATC1Q76KD6 591 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 SSX6Q7RTT6 188 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 GPAT4Q86UL3 456 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 CDC20BQ86Y33 519 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 ZGRF1Q86YA3 2104 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 LIX1LQ8IVB5 337 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 TIGD4Q8IY51 512 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF454Q8N9F8 522 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF511Q8NB15 262 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 NOXO1Q8NFA2 376 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 OR5AK2Q8NH90 309 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 SLC7A6Q92536 515 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 TMEM54Q969K7 222 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 TMEM45BQ96B21 275 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 SNRNP40Q96DI7 357 aaKnown RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF837Q96EG3 531 aaPredicted RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF486Q96H40 463 aaPredicted RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 SLC25A44Q96H78 314 aaPredicted RBP6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 RNF122Q9H9V4 155 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 BCO1Q9HAY6 547 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 LAMP5Q9UJQ1 280 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 B9D1Q9UPM9 204 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 KLHDC2Q9Y2U9 406 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 ETV7Q9Y603 341 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 V9GY05 133 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 CACNA1CQ13936 2221 aa6.18□□□□□ -1.42
HMGCS2-204ENST00000544913 CACNA1BQ00975 2339 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 SMIM30A4D0T7 59 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 OR14I1A6ND48 311 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 NAP1L6A6NFF2 107 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 FAM25EA8MYX2 175 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 NPIPA2E9PIF3 369 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 NPIPA3F8WFD2 350 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 AIPO00170 330 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 RGS13O14921 159 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 SELENOFO60613 162 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 SNAPC5O75971 98 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 MPZL1O95297 269 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 WNT11O96014 354 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 FAM157BP0CG42 384 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF43P17038 809 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 ERP29P30040 261 aaKnown RBP6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 SLC6A1P30531 599 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 CLDN17P56750 224 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 CAMK2DQ13557 499 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 INSL4Q14641 139 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 CEP78Q5JTW2 689 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 TMEM225Q6GV28 225 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 DNM1P34Q6PK57 102 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 SLC25A47Q6Q0C1 308 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 FOXL2NBQ6ZUU3 175 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 NR2C2APQ86WQ0 139 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 C20orf196Q8IYI0 205 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 TCTE3Q8IZS6 198 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 TOMM5Q8N4H5 51 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 RPRMLQ8N4K4 120 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 CISD2Q8N5K1 135 aaKnown RBP6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 MEIOBQ8N635 442 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 YIPF7Q8N8F6 280 aa6.17□□□□□ -1.42
HMGCS2-204ENST00000544913 SLC26A10Q8NG04 563 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms