RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 SGCEO43556 437 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 TSPAN9O75954 239 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 PSMB10P40306 273 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 MRPL19P49406 292 aaKnown RBP12.09□□□□□ -0.47
COPS7A-220ENST00000544725 RGS6P49758 472 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 LOXL3P58215 753 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 RPL27P61353 136 aaKnown RBP12.09□□□□□ -0.47
COPS7A-220ENST00000544725 VSNL1P62760 191 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 CYP51A1Q16850 503 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 OR2T2Q6IF00 324 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 BLOC1S3Q6QNY0 202 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 PATL1Q86TB9 770 aaKnown RBP12.09□□□□□ -0.47
COPS7A-220ENST00000544725 FUNDC1Q8IVP5 155 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 CLDN22Q8N7P3 220 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 ANKRD42Q8N9B4 389 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 PNLDC1Q8NA58 520 aaKnown RBP12.09□□□□□ -0.47
COPS7A-220ENST00000544725 OR5L1Q8NGL2 311 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 SLC26A7Q8TE54 656 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 TMEM255BQ8WV15 326 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 LHX4Q969G2 390 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 C20orf141Q9NUB4 165 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 ERVK-18Q9QC07 812 aa12.09□□□□□ -0.47
COPS7A-220ENST00000544725 ZNF816-ZNF321PA0A0X1KG74 233 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 BTBD17A6NE02 478 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 A6NIZ1 184 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 F5H5P2 479 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 FUT4P22083 530 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 PMELP40967 661 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 RAP1BP61224 184 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 RAP1AP62834 184 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 EGR3Q06889 387 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 KCNJ8Q15842 424 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 Q6ZTK2 550 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 NKAIN4Q8IVV8 208 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 GALNT4Q8N4A0 578 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 PCYOX1LQ8NBM8 494 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 OR11L1Q8NGX0 322 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 AENQ8WTP8 325 aaKnown RBP12.08□□□□□ -0.48
COPS7A-220ENST00000544725 TMEM239Q8WW34 195 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 RASD2Q96D21 266 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 CPPED1Q9BRF8 314 aaPredicted RBP12.08□□□□□ -0.48
COPS7A-220ENST00000544725 MMADHCQ9H3L0 296 aaPredicted RBP12.08□□□□□ -0.48
COPS7A-220ENST00000544725 CENPHQ9H3R5 247 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 EMC7Q9NPA0 242 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 PTTG3PQ9NZH4 202 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 CCDC167Q9P0B6 97 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 HIF3AQ9Y2N7 669 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 FAM96BQ9Y3D0 163 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 TET2Q6N021 2002 aaPredicted RBP12.08□□□□□ -0.48
COPS7A-220ENST00000544725 NOTCH3Q9UM47 2321 aa12.08□□□□□ -0.48
COPS7A-220ENST00000544725 MLNRO43193 412 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 SCG5P05408 212 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 TGFBR2P37173 567 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 GATA4P43694 442 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 TAS2R41P59536 307 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 HERPUD1Q15011 391 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 VAX1Q5SQQ9 334 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 RASSF5Q8WWW0 418 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 ERGIC1Q969X5 290 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 SIRPDQ9H106 197 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 TMEM100Q9NV29 134 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 VPREB3Q9UKI3 123 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 CAB39Q9Y376 341 aaPredicted RBP12.07□□□□□ -0.48
COPS7A-220ENST00000544725 MED31Q9Y3C7 131 aa12.07□□□□□ -0.48
COPS7A-220ENST00000544725 GPR37O15354 613 aa12.06□□□□□ -0.48
COPS7A-220ENST00000544725 OR5F1O95221 314 aa12.06□□□□□ -0.48
COPS7A-220ENST00000544725 FPR3P25089 353 aa12.06□□□□□ -0.48
COPS7A-220ENST00000544725 WDR4P57081 412 aaKnown RBP12.06□□□□□ -0.48
COPS7A-220ENST00000544725 CTXN1P60606 82 aa12.06□□□□□ -0.48
COPS7A-220ENST00000544725 C19orf18Q8NEA5 215 aa12.06□□□□□ -0.48
COPS7A-220ENST00000544725 Q8TCH9 128 aa12.06□□□□□ -0.48
COPS7A-220ENST00000544725 SLC7A6Q92536 515 aa12.06□□□□□ -0.48
COPS7A-220ENST00000544725 TAMM41Q96BW9 452 aa12.06□□□□□ -0.48
COPS7A-220ENST00000544725 POLR2J2Q9GZM3 115 aaKnown RBP12.06□□□□□ -0.48
COPS7A-220ENST00000544725 POLR2J3Q9H1A7 115 aaKnown RBP12.06□□□□□ -0.48
COPS7A-220ENST00000544725 TMCC3Q9ULS5 477 aa12.06□□□□□ -0.48
COPS7A-220ENST00000544725 ELOVL7A1L3X0 281 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 HTR3EA5X5Y0 456 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 OR6C6A6NF89 314 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 IQCF6A8MYZ5 107 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 FBP2O00757 339 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 POLR3GO15318 223 aaPredicted RBP12.05□□□□□ -0.48
COPS7A-220ENST00000544725 FBP1P09467 338 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 ARF6P62330 175 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 COX10Q12887 443 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 AQP6Q13520 282 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 TNFAIP8L3Q5GJ75 292 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 INTS11Q5TA45 600 aaKnown RBP12.05□□□□□ -0.48
COPS7A-220ENST00000544725 EPGNQ6UW88 154 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 DLEU7Q6UYE1 221 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 IGFN1Q86VF2 1251 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 CELF2-AS1Q8N7Q2 184 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 BHLHE23Q8NDY6 225 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 OR1F12Q8NHA8 337 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 APOBEC3DQ96AK3 386 aaPredicted RBP12.05□□□□□ -0.48
COPS7A-220ENST00000544725 NECAP2Q9NVZ3 263 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 CTSZQ9UBR2 303 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 ATPIF1Q9UII2 106 aa12.05□□□□□ -0.48
COPS7A-220ENST00000544725 RIMS3Q9UJD0 308 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms