RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ZNF420Q8TAQ5 688 aaPredicted RBP5.76□□□□□ -1.49
CDCA3-209ENST00000544610 FNDC9Q8TBE3 224 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 RASD2Q96D21 266 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 RNFT2Q96EX2 444 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF845Q96IR2 970 aaPredicted RBP5.76□□□□□ -1.49
CDCA3-209ENST00000544610 COG8Q96MW5 612 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 NUAK2Q9H093 628 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 SYT4Q9H2B2 425 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 NIPAL2Q9H841 368 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 ADGRL4Q9HBW9 690 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 ACOT13Q9NPJ3 140 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF701Q9NV72 531 aaPredicted RBP5.76□□□□□ -1.49
CDCA3-209ENST00000544610 PAK1IP1Q9NWT1 392 aaPredicted RBP5.76□□□□□ -1.49
CDCA3-209ENST00000544610 DNAJC27Q9NZQ0 273 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 SEC14L4Q9UDX3 406 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 MALT1Q9UDY8 824 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 B9D1Q9UPM9 204 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 GPR52Q9Y2T5 361 aa5.76□□□□□ -1.49
CDCA3-209ENST00000544610 ZANQ9Y493 2812 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 ACOD1A6NK06 481 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 PTGES3LE9PB15 166 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 DHHO43323 396 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 SLC16A7O60669 478 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 MRPL33O75394 65 aaKnown RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 CRLF1O75462 422 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 THBDP07204 575 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 HTR1AP08908 422 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 TACSTD2P09758 323 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 GAAP10253 952 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 HLA-DOBP13765 273 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 PPP3CBP16298 524 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 CTLA4P16410 223 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 PTNP21246 168 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 PSMA1P25786 263 aaKnown RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 LAP3P28838 519 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 OR3A2P47893 321 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF84P51523 738 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 WNT4P56705 351 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 CLDN17P56750 224 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 CLRN1P58418 232 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 PCBD1P61457 104 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 TGFBR3Q03167 851 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 EMX1Q04741 257 aaPredicted RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 MLLT11Q13015 90 aaPredicted RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 SPHARQ15513 63 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 TRAM1Q15629 374 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 SMN1Q16637 294 aaKnown RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 TIMM50Q3ZCQ8 353 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 CDONQ4KMG0 1287 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 KLHL12Q53G59 568 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 BEX5Q5H9J7 111 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 FAM27BQ5VT28 67 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 XAF1Q6GPH4 301 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 FDX2Q6P4F2 183 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 TMEM154Q6P9G4 183 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 KCTD18Q6PI47 426 aaPredicted RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF704Q6ZNC4 412 aaPredicted RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 GDPGP1Q6ZNW5 385 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 PLEKHG7Q6ZR37 379 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 AAED1Q7RTV5 226 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 IGFN1Q86VF2 1251 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 GPR137CQ8N3F9 429 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 NANOGP1Q8N7R0 232 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF485Q8NCK3 441 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 C1orf162Q8NEQ5 155 aaPredicted RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 SLC26A10Q8NG04 563 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 OR6K3Q8NGY3 331 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 OTOSQ8NHW6 89 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 TMEM171Q8WVE6 324 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 THRSPQ92748 146 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 RORBQ92753 470 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 MCHR2Q969V1 340 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 MUL1Q969V5 352 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 ZC3HAV1LQ96H79 300 aaKnown RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 INTS14Q96SY0 518 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF649Q9BS31 505 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 TMEM204Q9BSN7 226 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 HCAR1Q9BXC0 346 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 PRRG4Q9BZD6 226 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 OR10A4Q9H209 315 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 OR51V1Q9H2C8 321 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 SLCO5A1Q9H2Y9 848 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 NELFAQ9H3P2 528 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 CXorf56Q9H5V9 222 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 WDR76Q9H967 626 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 SIAEQ9HAT2 523 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 RPRD1BQ9NQG5 326 aaKnown RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 MED29Q9NX70 200 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 ERVK13-1Q9NX77 482 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 PROCRQ9UNN8 238 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 NOSIPQ9Y314 301 aaKnown RBP5.75□□□□□ -1.49
CDCA3-209ENST00000544610 EMC9Q9Y3B6 208 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 MED12LQ86YW9 2145 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 ANK2Q01484 3957 aa5.75□□□□□ -1.49
CDCA3-209ENST00000544610 ELOA3CA0A087WX78 387 aaPredicted RBP5.74□□□□□ -1.49
CDCA3-209ENST00000544610 FAM183AA6NL82 134 aa5.74□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF670-ZNF695F2Z2N8 137 aa5.74□□□□□ -1.49
CDCA3-209ENST00000544610 HS3ST1O14792 307 aa5.74□□□□□ -1.49
CDCA3-209ENST00000544610 MYL12BO14950 172 aa5.74□□□□□ -1.49
CDCA3-209ENST00000544610 RAMP1O60894 148 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms