RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 YIPF7Q8N8F6 280 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ZNF610Q8N9Z0 462 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 NAXEQ8NCW5 288 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ST7LQ8TDW4 575 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 RNF133Q8WVZ7 376 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 BCL2L2Q92843 193 aaPredicted RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 SPTSSAQ969W0 71 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ZNF837Q96EG3 531 aaPredicted RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 C4orf36Q96KX1 117 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 OR8B4Q96RC9 309 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 MGLLQ99685 303 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 RNF121Q9H920 327 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 SP140LQ9H930 580 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 BABAM2Q9NXR7 383 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 Q9UFV3 132 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 CLEC2DQ9UHP7 191 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 GDF2Q9UK05 429 aaPredicted RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 GNG8Q9UK08 70 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ARPC4-TTLL3A0A0A6YYG9 625 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 ACOD1A6NK06 481 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 EEF1E1-BLOC1S5C9J1V9 151 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 EEF1E1O43324 174 aaKnown RBP8.32□□□□□ -1.08
YBX3-215ENST00000544504 SGCEO43556 437 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 CLDN14O95500 239 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 WNT11O96014 354 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 SCG5P05408 212 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 COX5BP10606 129 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 CD53P19397 219 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 PSMB1P20618 241 aaKnown RBP8.32□□□□□ -1.08
YBX3-215ENST00000544504 BMP5P22003 454 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 IGHV1-2P23083 117 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 IL32P24001 234 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 EDNRAP25101 427 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 TGM4P49221 684 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 HCCSP53701 268 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 TRAM1Q15629 374 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 TBRG1Q3YBR2 411 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 TIMM50Q3ZCQ8 353 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 ELFN2Q5R3F8 820 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 SFRP5Q5T4F7 317 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 RPL22L1Q6P5R6 122 aaKnown RBP8.32□□□□□ -1.08
YBX3-215ENST00000544504 VASH1Q7L8A9 365 aaPredicted RBP8.32□□□□□ -1.08
YBX3-215ENST00000544504 TGIF2LYQ8IUE0 185 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 LINC00346Q8IVM7 164 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 SKA3Q8IX90 412 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 LRRC18Q8N456 261 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 RPRMLQ8N4K4 120 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 STEAP2Q8NFT2 490 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 SPRYD4Q8WW59 207 aaPredicted RBP8.32□□□□□ -1.08
YBX3-215ENST00000544504 GATAD2BQ8WXI9 593 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 SLAMF6Q96DU3 332 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 ATF6BQ99941 703 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 SH3GL3Q99963 347 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 ZNF649Q9BS31 505 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 OPN3Q9H1Y3 402 aaPredicted RBP8.32□□□□□ -1.08
YBX3-215ENST00000544504 OR10A4Q9H209 315 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 CENPMQ9NSP4 180 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 DDX28Q9NUL7 540 aaKnown RBP8.32□□□□□ -1.08
YBX3-215ENST00000544504 PLEK2Q9NYT0 353 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 COPS3Q9UNS2 423 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 AMDHD2Q9Y303 409 aa8.32□□□□□ -1.08
YBX3-215ENST00000544504 LSM2Q9Y333 95 aaKnown RBP8.32□□□□□ -1.08
YBX3-215ENST00000544504 IQCMA0A1B0GVH7 501 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 SMIM31A0A1B0GVY4 71 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 OR6C6A6NF89 314 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 A8MXE2 369 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 CCRL2O00421 344 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 GPRIN2O60269 458 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 DOK2O60496 412 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 NOL3O60936 208 aaKnown RBP8.31□□□□□ -1.08
YBX3-215ENST00000544504 SEC14L2O76054 403 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 CD1AP06126 327 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 LCKP06239 509 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 HSMCR30P0CW71 290 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 ZNF32P17041 273 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 PSMA1P25786 263 aaKnown RBP8.31□□□□□ -1.08
YBX3-215ENST00000544504 HSD11B1P28845 292 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 OPRL1P41146 370 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 ASCL1P50553 236 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 OR12D2P58182 307 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 ADORA2A-AS1P86434 159 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 DBPQ10586 325 aaPredicted RBP8.31□□□□□ -1.08
YBX3-215ENST00000544504 TPBGQ13641 420 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 GABRA6Q16445 453 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 GSG1Q2KHT4 349 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 TP53I3Q53FA7 332 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 ARMCX4Q5H9R4 360 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 ZNF684Q5T5D7 378 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 OR2G6Q5TZ20 316 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 C9orf135Q5VTT2 229 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 FDX2Q6P4F2 183 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 CFAP77Q6ZQR2 320 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 BHLHA15Q7RTS1 189 aaPredicted RBP8.31□□□□□ -1.08
YBX3-215ENST00000544504 KLBQ86Z14 1044 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 ACBD4Q8NC06 268 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 ZNF485Q8NCK3 441 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 THRSPQ92748 146 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 UFD1Q92890 307 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 MUCL1Q96DR8 90 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 FBXO17Q96EF6 278 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms