RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 EDAQ92838 391 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 PBOV1Q9GZY1 135 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 B3GNT2Q9NY97 397 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 CFAP54Q96N23 3096 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 LOC102723996A0A087X1L8 192 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 RLN1P04808 185 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 CELA2AP08217 269 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 MFAP5Q13361 173 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 FAM198BQ6UWH4 519 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 CFAP77Q6ZQR2 320 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 GABRG1Q8N1C3 465 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 FTMTQ8N4E7 242 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 MAFAQ8NHW3 353 aaPredicted RBP16.02■□□□□ 0.16
VIM-209ENST00000544301 FOXRED1Q96CU9 486 aaPredicted RBP16.02■□□□□ 0.16
VIM-209ENST00000544301 LHFPL6Q9Y693 200 aa16.02■□□□□ 0.16
VIM-209ENST00000544301 OR2M5A3KFT3 312 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 SLC22A5O76082 557 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 OR2A4O95047 310 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 SFTPDP35247 375 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 TSPAN5P62079 268 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 PMPCAQ10713 525 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 PRAMEF20Q5VT98 475 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 ZNF813Q6ZN06 617 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 PTX4Q96A99 478 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 OR2A7Q96R45 310 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 CITED4Q96RK1 184 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 DPCDQ9BVM2 203 aaPredicted RBP16.01■□□□□ 0.15
VIM-209ENST00000544301 SEC61A2Q9H9S3 476 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 SCPEP1Q9HB40 452 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 GPN3Q9UHW5 284 aaPredicted RBP16.01■□□□□ 0.15
VIM-209ENST00000544301 GDF2Q9UK05 429 aaPredicted RBP16.01■□□□□ 0.15
VIM-209ENST00000544301 NXT1Q9UKK6 140 aaKnown RBP16.01■□□□□ 0.15
VIM-209ENST00000544301 A0A0A6YYH2 397 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 A6NJ64 397 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 TNFRSF10AO00220 468 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 TP53I11O14683 189 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 YKT6O15498 198 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 RAMP1O60894 148 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 NOS1APO75052 506 aaPredicted RBP16.01■□□□□ 0.15
VIM-209ENST00000544301 MPC2O95563 127 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 BDKRB2P30411 391 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 CDAP32320 146 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 RAP2BP61225 183 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 HYAL4Q2M3T9 481 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 MOGAT2Q3SYC2 334 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 TMEM176BQ3YBM2 270 aaPredicted RBP16.01■□□□□ 0.15
VIM-209ENST00000544301 CARD17Q5XLA6 110 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 SLC25A47Q6Q0C1 308 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 TMEM229BQ8NBD8 167 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 OR6X1Q8NH79 312 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 SLC25A43Q8WUT9 341 aaPredicted RBP16.01■□□□□ 0.15
VIM-209ENST00000544301 ADAT3Q96EY9 351 aaPredicted RBP16.01■□□□□ 0.15
VIM-209ENST00000544301 OXGR1Q96P68 337 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 PTGES2Q9H7Z7 377 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 CNTD2Q9H8S5 307 aa16.01■□□□□ 0.15
VIM-209ENST00000544301 SYT7O43581 403 aa16■□□□□ 0.15
VIM-209ENST00000544301 UMODP07911 640 aa16■□□□□ 0.15
VIM-209ENST00000544301 TDGF1P13385 188 aa16■□□□□ 0.15
VIM-209ENST00000544301 KLK2P20151 261 aa16■□□□□ 0.15
VIM-209ENST00000544301 ADH6P28332 368 aa16■□□□□ 0.15
VIM-209ENST00000544301 GNALP38405 381 aa16■□□□□ 0.15
VIM-209ENST00000544301 EIF1P41567 113 aaKnown RBP16■□□□□ 0.15
VIM-209ENST00000544301 TAS2R19P59542 299 aa16■□□□□ 0.15
VIM-209ENST00000544301 ZNF239Q16600 458 aaKnown RBP16■□□□□ 0.15
VIM-209ENST00000544301 OR1J2Q8NGS2 313 aa16■□□□□ 0.15
VIM-209ENST00000544301 WDR89Q96FK6 387 aaPredicted RBP16■□□□□ 0.15
VIM-209ENST00000544301 HDGFL3Q9Y3E1 203 aa16■□□□□ 0.15
VIM-209ENST00000544301 IGHV1-45A0A0A0MS14 117 aa16■□□□□ 0.15
VIM-209ENST00000544301 UBE2QL1A1L167 161 aa16■□□□□ 0.15
VIM-209ENST00000544301 RAB6AP20340 208 aa16■□□□□ 0.15
VIM-209ENST00000544301 HSD11B1P28845 292 aa16■□□□□ 0.15
VIM-209ENST00000544301 CLDN6P56747 220 aa16■□□□□ 0.15
VIM-209ENST00000544301 DHODHQ02127 395 aa16■□□□□ 0.15
VIM-209ENST00000544301 SNTA1Q13424 505 aa16■□□□□ 0.15
VIM-209ENST00000544301 FAM109AQ8N4B1 249 aa16■□□□□ 0.15
VIM-209ENST00000544301 ZMAT3Q9HA38 289 aaKnown RBP16■□□□□ 0.15
VIM-209ENST00000544301 POLR1DQ9Y2S0 133 aa16■□□□□ 0.15
VIM-209ENST00000544301 PHF3Q92576 2039 aaKnown RBP16■□□□□ 0.15
VIM-209ENST00000544301 WDFY3Q8IZQ1 3526 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 AQP7P3A6NL99 342 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 D6RAR5 112 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 ZNF43P17038 809 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 OR3A3P47888 321 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 CAPZA1P52907 286 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 IKZF1Q13422 519 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 HDDC2Q7Z4H3 204 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 OR8H3Q8N146 312 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 OR1M1Q8NGA1 313 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 OR52N4Q8NGI2 321 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 OR2AJ1Q8NGZ0 328 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 ZBTB8AQ96BR9 441 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 IMMP1LQ96LU5 166 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 CLEC4MQ9H2X3 399 aaPredicted RBP15.99■□□□□ 0.15
VIM-209ENST00000544301 SLCO5A1Q9H2Y9 848 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 CDCP1Q9H5V8 836 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 TMEM138Q9NPI0 162 aa15.99■□□□□ 0.15
VIM-209ENST00000544301 A0A1B0GTI1 187 aa15.98■□□□□ 0.15
VIM-209ENST00000544301 PLSCR5A0PG75 271 aa15.98■□□□□ 0.15
VIM-209ENST00000544301 ZNF878C9JN71 531 aa15.98■□□□□ 0.15
VIM-209ENST00000544301 RAB3DO95716 219 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms