RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 PLXNA2O75051 1894 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 IGLV3-10A0A075B6K4 115 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 L7N2F9 121 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 GOSR2O14653 212 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 PPP1R2P9O14990 202 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 AGPAT2O15120 278 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 SUPT7LO94864 414 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 AGTP01019 485 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 ANXA5P08758 320 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 CD1EP15812 388 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 HMGA1P17096 107 aaKnown RBP2.64□□□□□ -1.99
SCFD1-207ENST00000544052 SLC2A5P22732 501 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 COX7A1P24310 79 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 DEKP35659 375 aaKnown RBP2.64□□□□□ -1.99
SCFD1-207ENST00000544052 ARRB1P49407 418 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-207ENST00000544052 ACOT2P49753 483 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 CAV2P51636 162 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 EIF3EP60228 445 aaKnown RBP2.64□□□□□ -1.99
SCFD1-207ENST00000544052 ARHGAP19Q14CB8 494 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 PAGE3Q5JUK9 113 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 SDHAF4Q5VUM1 108 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 SASS6Q6UVJ0 657 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 TMIGD1Q6UXZ0 262 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 ZNF620Q6ZNG0 422 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 Q6ZSR3 168 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 PUSL1Q8N0Z8 303 aaKnown RBP2.64□□□□□ -1.99
SCFD1-207ENST00000544052 LYG1Q8N1E2 194 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 MS4A15Q8N5U1 240 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 B3GNT7Q8NFL0 401 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 OR10G3Q8NGC4 313 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 OR51S1Q8NGJ8 323 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 ERMNQ8TAM6 284 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 SLC22A8Q8TCC7 542 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 STARD8Q92502 1023 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 SORT1Q99523 831 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 CCDC94Q9BW85 323 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-207ENST00000544052 SLC7A5P2Q9GIP4 190 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 NEK6Q9HC98 313 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 SH2D2AQ9NP31 389 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 ZMAT5Q9UDW3 170 aaKnown RBP2.64□□□□□ -1.99
SCFD1-207ENST00000544052 NDRG2Q9UN36 371 aaKnown RBP2.64□□□□□ -1.99
SCFD1-207ENST00000544052 CCL26Q9Y258 94 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 CACNA1EQ15878 2313 aa2.64□□□□□ -1.99
SCFD1-207ENST00000544052 ATRXP46100 2492 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 FAM231BA6NCW3 169 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 CCDC182A6NF36 153 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 ERI2A8K979 691 aaKnown RBP2.63□□□□□ -1.99
SCFD1-207ENST00000544052 LAD1O00515 517 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 EIF3HO15372 352 aaKnown RBP eCLIP2.63□□□□□ -1.99
SCFD1-207ENST00000544052 MMP23AO75900 390 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 OR2J3O76001 311 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 IGHV2-5P01817 119 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 FTH1P02794 183 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 ZNF43P17038 809 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 PSMC3P17980 439 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 CCNE1P24864 410 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 CASP1P29466 404 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 VHLP40337 213 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 RPS9P46781 194 aaKnown RBP2.63□□□□□ -1.99
SCFD1-207ENST00000544052 ETV1P50549 477 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 PRPS1P60891 318 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 GTF2BQ00403 316 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 NDPQ00604 133 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 TLE4Q04727 773 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 ATP6AP1Q15904 470 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 ZNF630Q2M218 657 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-207ENST00000544052 VPS26BQ4G0F5 336 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 GPR157Q5UAW9 335 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 RAET1LQ5VY80 246 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 THOC6Q86W42 341 aaKnown RBP2.63□□□□□ -1.99
SCFD1-207ENST00000544052 MFSD6LQ8IWD5 586 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 CCDC71LQ8N9Z2 235 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 OR52K1Q8NGK4 314 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 SMARCD2Q92925 531 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 KIAA1143Q96AT1 154 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-207ENST00000544052 MED8Q96G25 268 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 HSFY1Q96LI6 401 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 MAGEB18Q96M61 343 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 HES7Q9BYE0 225 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 YTHDF1Q9BYJ9 559 aaKnown RBP2.63□□□□□ -1.99
SCFD1-207ENST00000544052 GBA3Q9H227 469 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 ZNF160Q9HCG1 818 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 PITPNC1Q9UKF7 332 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 CELSR3Q9NYQ7 3312 aa2.63□□□□□ -1.99
SCFD1-207ENST00000544052 IGF2RP11717 2491 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 MYBPHLA2RUH7 354 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 GOLGA8IPA6NC78 632 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 GOLGA8JA6NMD2 632 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 TCP11X1B4DZS4 312 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 C9JVG2 144 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 SPECC1L-ADORA2AF8WAN1 911 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 CCL21O00585 134 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 AKR7A2O43488 359 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 CDH16O75309 829 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 TNFSF13O75888 250 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 IGKV3-15P01624 115 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 CLTAP09496 248 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 STAG3L3P0CL85 134 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 FUT3P21217 361 aa2.62□□□□□ -1.99
SCFD1-207ENST00000544052 GABRR2P28476 465 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms