RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ZNF672Q499Z4 452 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 KCTD18Q6PI47 426 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 UNQ6126/PRO20091Q6UXV3 157 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 KRT77Q7Z794 578 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 LILRB1Q8NHL6 650 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RNF133Q8WVZ7 376 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 CNBD2Q96M20 576 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ANKRD60Q9BZ19 345 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 Q9H521 79 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ELOVL3Q9HB03 270 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 DDX28Q9NUL7 540 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 COPS3Q9UNS2 423 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OR2T7P0C7T2 308 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 NR4A1P22736 598 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 MYF6P23409 242 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RAD52P43351 418 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SLC6A9P48067 706 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 HGFACQ04756 655 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 LRRN1Q6UXK5 716 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 NUP37Q8NFH4 326 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OR2T27Q8NH04 317 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ABHD4Q8TB40 342 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ASB17Q8WXJ9 295 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 FBXW5Q969U6 566 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 LGALS12Q96DT0 336 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 DCLRE1CQ96SD1 692 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 KCNJ15Q99712 375 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 MROQ9BYG7 248 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 CA10Q9NS85 328 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 IKZF2Q9UKS7 526 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PCDHGB1Q9Y5G3 927 aa12.51□□□□□ -0.41
TNFRSF1A-216ENST00000543995 E7EQL1 145 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 M0R135 149 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PSMD9O00233 223 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 HS3ST1O14792 307 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 LCKP06239 509 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PCSK6P29122 969 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 WNT5AP41221 380 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PRKXP51817 358 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 UCP2P55851 309 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 TPTEP56180 551 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ACTC1P68032 377 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ACTA1P68133 377 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RAB40BQ12829 278 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 KLHL22Q53GT1 634 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF322Q6U7Q0 402 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RHOUQ7L0Q8 258 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF101Q8IZC7 436 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RFLNBQ8N5W9 214 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 BPIFB6Q8NFQ5 453 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 FBLIM1Q8WUP2 373 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 IPCEF1Q8WWN9 437 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF799Q96GE5 643 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 BCL2L14Q9BZR8 327 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 EXOGQ9Y2C4 368 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PTPN13Q12923 2485 aa12.5□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RTTNQ86VV8 2226 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 A0A1W2PQL4 384 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 DAPL1A0PJW8 107 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 VSTM5A8MXK1 200 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SMPD2O60906 423 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 FAM20BO75063 409 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 FADS2O95864 444 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ACSM4P0C7M7 580 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 THBS4P35443 961 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 GLRXP35754 106 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OPRL1P41146 370 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 FABP6P51161 128 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RPS23P62266 143 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 NKX6-1P78426 367 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 EGR3Q06889 387 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RGS7BPQ6MZT1 257 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ZNF283Q8N7M2 679 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OR52I1Q8NGK6 324 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OR1J1Q8NGS3 322 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SNX33Q8WV41 574 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 OR8B4Q96RC9 309 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 DHRS9Q9BPW9 319 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PLEKHF2Q9H8W4 249 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 FAIMQ9NVQ4 179 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SLCO1C1Q9NYB5 712 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ABCA4P78363 2273 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 IRGMA1A4Y4 181 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 XPNPEP2O43895 674 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 GPRIN2O60269 458 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 NGFP01138 241 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 APOC1P02654 83 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 LCATP04180 440 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 APOBEC3AP31941 199 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 CX3CR1P49238 355 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RGS6P49758 472 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 KRTAP10-9P60411 292 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PPP1CBP62140 327 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RSPO1Q2MKA7 263 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 KRTAP27-1Q3LI81 207 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 DRAM2Q6UX65 266 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 RFPL4BQ6ZWI9 263 aa12.48□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SSX6Q7RTT6 188 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms