RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 NUP50Q9UKX7 468 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 PCDHGA9Q9Y5G4 932 aaKnown RBP8.24□□□□□ -1.09
GNE-206ENST00000543356 CTDSP2O14595 271 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 H2BFMP0C1H6 154 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 CD40LGP29965 261 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 CDAP32320 146 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 GNALP38405 381 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 SRYQ05066 204 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 MFGE8Q08431 387 aaPredicted RBP8.24□□□□□ -1.09
GNE-206ENST00000543356 Q499Y3 187 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 HSD17B12Q53GQ0 312 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 TOR2AQ5JU69 321 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 RIPPLY2Q5TAB7 128 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 SPATC1Q76KD6 591 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 ZNF676Q8N7Q3 588 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 IL17RDQ8NFM7 739 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 ABHD3Q8WU67 409 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 ACOT12Q8WYK0 555 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 DERL3Q96Q80 235 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 ATF6BQ99941 703 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 SCNM1Q9BWG6 230 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 DEFB127Q9H1M4 99 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 LDAHQ9H6V9 325 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 SPRR3Q9UBC9 169 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 POLR1DQ9Y2S0 133 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 CMAHPQ9Y471 501 aa8.24□□□□□ -1.09
GNE-206ENST00000543356 TRAV6A0A075B6T7 132 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 ANKRD61A6NGH8 418 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 A8MV72 311 aaPredicted RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 ZNF878C9JN71 531 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 TFECO14948 347 aaPredicted RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 NCR1O76036 304 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 PNPP00491 289 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 NTF4P34130 210 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 GUCA1AP43080 201 aaPredicted RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 CAV3P56539 151 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 MRPS34P82930 218 aaKnown RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 PMP22Q01453 160 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 CORO6Q6QEF8 472 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 CFAP77Q6ZQR2 320 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 ZADH2Q8N4Q0 377 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 OR10S1Q8NGN2 331 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 CPT1CQ8TCG5 803 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 GPR148Q8TDV2 347 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 KCTD12Q96CX2 325 aaKnown RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 WDYHV1Q96HA8 205 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 DMRTB1Q96MA1 342 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 WACQ9BTA9 647 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 NIPAL2Q9H841 368 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 BCO1Q9HAY6 547 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 DDX28Q9NUL7 540 aaKnown RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 ZNF221Q9UK13 617 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 A0A087WV48 116 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 TRBV5-7A0A0A0MS05 114 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 A0A0G2JK05 382 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 A0A1B0GTH9 108 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 SMIM30A4D0T7 59 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 ZNF724A8MTY0 619 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 RAF1P04049 648 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 HOXB1P14653 301 aaPredicted RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 SPINK2P20155 84 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 RAB3BP20337 219 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 NPR2P20594 1047 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 MMP16P51512 607 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 PPP5CP53041 499 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 RNPS1Q15287 305 aaKnown RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 DDI2Q5TDH0 399 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 NR2C2APQ86WQ0 139 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 GPR137CQ8N3F9 429 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 CHAC2Q8WUX2 184 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 CEP19Q96LK0 163 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 LINC00470Q9BZP3 86 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 ZCCHC4Q9H5U6 513 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 EXO5Q9H790 373 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 MOB1AQ9H8S9 216 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 NOX4Q9NPH5 578 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 PNRC2Q9NPJ4 139 aaKnown RBP8.23□□□□□ -1.09
GNE-206ENST00000543356 ASH2LQ9UBL3 628 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 FBXL3Q9UKT7 428 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 MSRB2Q9Y3D2 182 aa8.23□□□□□ -1.09
GNE-206ENST00000543356 A0A1B0GVC2 190 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 LOC110117498-PIK3R3F6TDL0 507 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 PDCD5O14737 125 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 PIN1P1O15428 100 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 TMEM127O75204 238 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 ISG15P05161 165 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 TNFSF8P32971 234 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 PPP3R1P63098 170 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 HIST1H3AP68431 136 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 ENDOGQ14249 297 aaKnown RBP8.22□□□□□ -1.09
GNE-206ENST00000543356 SGCAQ16586 387 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 FAM209BQ5JX69 171 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 SPANXN2Q5MJ10 180 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 HIST2H3PS2Q5TEC6 136 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 SFXN4Q6P4A7 337 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 MZT2AQ6P582 158 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 KLHL24Q6TFL4 600 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 HIST2H3AQ71DI3 136 aa8.22□□□□□ -1.09
GNE-206ENST00000543356 LAX1Q8IWV1 398 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms