RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 CEACAM16Q2WEN9 425 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 IDNKQ5T6J7 187 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 VHLLQ6RSH7 139 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 FGD2Q7Z6J4 655 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 LAX1Q8IWV1 398 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 CPT1CQ8TCG5 803 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 TAAR6Q96RI8 345 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 ATF6BQ99941 703 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 BCO1Q9HAY6 547 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 PARPBPQ9NWS1 579 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 CMAHPQ9Y471 501 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 N6AMT1Q9Y5N5 214 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 SPTBN2O15020 2390 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 TRBV5-5A0A0J9YX44 114 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 MRPS34P82930 218 aaKnown RBP9.7□□□□□ -0.86
SCG3-202ENST00000542355 RIPPLY2Q5TAB7 128 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 FAM27BQ5VT28 67 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 Q6ZS92 163 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 PARP16Q8N5Y8 322 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 GJC3Q8NFK1 279 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 TMEM106AQ96A25 262 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 SH3GL3Q99963 347 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 SLC25A18Q9H1K4 315 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 GPR35Q9HC97 309 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 PNRC2Q9NPJ4 139 aaKnown RBP9.7□□□□□ -0.86
SCG3-202ENST00000542355 G6PC2Q9NQR9 355 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 SLC7A10Q9NS82 523 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 DAPK2Q9UIK4 370 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 SLC5A6Q9Y289 635 aa9.7□□□□□ -0.86
SCG3-202ENST00000542355 AK6Q9Y3D8 172 aaKnown RBP9.7□□□□□ -0.86
SCG3-202ENST00000542355 TRBV23-1A0A0A0MS06 115 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 SLC22A20A6NK97 555 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 ZNF724A8MTY0 619 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 MKRN2OSH3BPM6 223 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 RRP8O43159 456 aaKnown RBP9.69□□□□□ -0.86
SCG3-202ENST00000542355 B4GALT1P15291 398 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 NPR2P20594 1047 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 MAPK3P27361 379 aaPredicted RBP9.69□□□□□ -0.86
SCG3-202ENST00000542355 DCTDP32321 178 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 PRKXP51817 358 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 GALK2Q01415 458 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 SLC25A35Q3KQZ1 300 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 CEP78Q5JTW2 689 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 SPANXN2Q5MJ10 180 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 DDI2Q5TDH0 399 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 SFXN4Q6P4A7 337 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 RHOUQ7L0Q8 258 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 SNX29P2Q8IUI4 249 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 CROCCP3Q8IVE0 287 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 RBMXL3Q8N7X1 1067 aaKnown RBP9.69□□□□□ -0.86
SCG3-202ENST00000542355 TSEN15Q8WW01 171 aaKnown RBP9.69□□□□□ -0.86
SCG3-202ENST00000542355 FBXO17Q96EF6 278 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 FOXB1Q99853 325 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 SLCO5A1Q9H2Y9 848 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 TMEM38BQ9NVV0 291 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 FAM206AQ9NX38 181 aa9.69□□□□□ -0.86
SCG3-202ENST00000542355 A0A0G2JK05 382 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 HNRNPCP07910 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCG3-202ENST00000542355 SLC2A2P11168 524 aaPredicted RBP9.68□□□□□ -0.86
SCG3-202ENST00000542355 PPP5CP53041 499 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 ZNF45Q02386 682 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 BCL2L15Q5TBC7 163 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 NUFIP2Q7Z417 695 aaKnown RBP9.68□□□□□ -0.86
SCG3-202ENST00000542355 CCDC190Q86UF4 302 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 ABHD17AQ96GS6 310 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 SLC30A2Q9BRI3 323 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 PRDM14Q9GZV8 571 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 MIXL1Q9H2W2 232 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 RNF122Q9H9V4 155 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 K7ENP7 123 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 TAF4O00268 1085 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 AQP7O14520 342 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 HPGDSO60760 199 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 PATE4P0C8F1 98 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 SLC2A1P11166 492 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 CFL1P23528 166 aaKnown RBP9.68□□□□□ -0.86
SCG3-202ENST00000542355 PLEKHN1Q494U1 663 aaPredicted RBP9.68□□□□□ -0.86
SCG3-202ENST00000542355 C9orf135Q5VTT2 229 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 INO80CQ6PI98 192 aaPredicted RBP9.68□□□□□ -0.86
SCG3-202ENST00000542355 P4HA3Q7Z4N8 544 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 ZNF433Q8N7K0 673 aaPredicted RBP9.68□□□□□ -0.86
SCG3-202ENST00000542355 OR5M9Q8NGP3 310 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 ASB5Q8WWX0 329 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 PBOV1Q9GZY1 135 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 NIPAL2Q9H841 368 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 PLEK2Q9NYT0 353 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 UPB1Q9UBR1 384 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 DHDHQ9UQ10 334 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 B3GNT3Q9Y2A9 372 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 CACNA1CQ13936 2221 aa9.68□□□□□ -0.86
SCG3-202ENST00000542355 NOTOA8MTQ0 251 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 F5H5K5 113 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 P2RY10O00398 339 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 RAF1P04049 648 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ISG15P05161 165 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 EPXP11678 715 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ZNF121P58317 390 aaPredicted RBP9.67□□□□□ -0.86
SCG3-202ENST00000542355 ELFN2Q5R3F8 820 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 STAC2Q6ZMT1 411 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ZNF704Q6ZNC4 412 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms