RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 LRRC18Q8N456 261 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 PROKR2Q8NFJ6 384 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 C11orf40Q8WZ69 217 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 ZNF416Q9BWM5 594 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 HCAR1Q9BXC0 346 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 RAB1BQ9H0U4 201 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 C1orf198Q9H425 327 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 RIBC2Q9H4K1 309 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 RERGLQ9H628 205 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 RNF121Q9H920 327 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 NOX3Q9HBY0 568 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 CCNB1IP1Q9NPC3 277 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 HINT3Q9NQE9 182 aaKnown RBP7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 KCNG2Q9UJ96 466 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 TIMM10BQ9Y5J6 103 aa7.48□□□□□ -1.21
CLSTN3-212ENST00000541770 FAM183AA6NL82 134 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 DLGAP1O14490 977 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 PRKYO43930 277 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 GLCEO94923 617 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 MPZL1O95297 269 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 SNAP29O95721 258 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 CRYAAP02489 173 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 TFP02787 698 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 GYPBP06028 91 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 CLUP10909 449 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 DAOP14920 347 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 ZNF32P17041 273 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 PCMT1P22061 227 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 SLC2A5P22732 501 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 PEX2P28328 305 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 FMO3P31513 532 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 PYCR1P32322 319 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 GGT2P36268 569 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 SERPINF1P36955 418 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 IDH3GP51553 393 aaPredicted RBP7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 CDC42P60953 191 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 PSG4Q00888 419 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 NAAAQ02083 359 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 TEKQ02763 1124 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 PLP2Q04941 152 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 SCRN3Q0VDG4 424 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 RAB39AQ14964 217 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 PCK2Q16822 640 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 TEX30Q5JUR7 227 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 NXNL2Q5VZ03 156 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 LPCAT4Q643R3 524 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 PLBD1Q6P4A8 553 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 UGT2A3Q6UWM9 527 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 ZNF584Q8IVC4 421 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 CPOQ8IVL8 374 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 ALDH16A1Q8IZ83 802 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 OR8J1Q8NGP2 316 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 OR9Q1Q8NGQ5 310 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 TMEM163Q8TC26 289 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 ZNF418Q8TF45 676 aaPredicted RBP7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 ZNRF4Q8WWF5 429 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 TRUB1Q8WWH5 349 aaKnown RBP7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 MBOAT4Q96T53 435 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 PITX2Q99697 317 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 TOR3AQ9H497 397 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 MARCH7Q9H992 704 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 LPAR2Q9HBW0 351 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 EMC7Q9NPA0 242 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 CA10Q9NS85 328 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 MRPL22Q9NWU5 206 aaKnown RBP7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 SMPD3Q9NY59 655 aaPredicted RBP7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 NKX1-2Q9UD57 310 aaPredicted RBP7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 ATPIF1Q9UII2 106 aa7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 NDRG4Q9ULP0 352 aaKnown RBP7.47□□□□□ -1.21
CLSTN3-212ENST00000541770 A0A0A6YYJ9 748 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 IGHV2OR16-5A0A0B4J2B6 119 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 IQCMA0A1B0GVH7 501 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 B9A039 149 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 TRIM77I1YAP6 450 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 SLC16A6O15403 523 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 LILRA1O75019 489 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 GPANK1O95872 356 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 HLA-DQA2P01906 255 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 ERCC1P07992 297 aaPredicted RBP7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 CELA3BP08861 270 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 OR4A8P0C604 315 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 COX5BP10606 129 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF35P13682 527 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF823P16415 610 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 GSTT1P30711 240 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 CDH15P55291 814 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 HIST1H3AP68431 136 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 DBPQ10586 325 aaPredicted RBP7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 MEP1BQ16820 701 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 LRRC36Q1X8D7 754 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 ZIK1Q3SY52 487 aaPredicted RBP7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 PABPC1L2AQ5JQF8 200 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 SLC25A30Q5SVS4 291 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 HIST2H3PS2Q5TEC6 136 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 AADACL4Q5VUY2 407 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 HIST2H3AQ71DI3 136 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 MYPOPQ86VE0 399 aaPredicted RBP7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 GLCCI1Q86VQ1 547 aa7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 ZCCHC24Q8N2G6 241 aaKnown RBP7.46□□□□□ -1.22
CLSTN3-212ENST00000541770 GALNT4Q8N4A0 578 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms