RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TPTEP56180 551 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 DEFB113Q30KQ7 82 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 KCTD18Q6PI47 426 aaPredicted RBP16.19■□□□□ 0.18
VPS33A-205ENST00000541169 DEGS2Q6QHC5 323 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 CFAP77Q6ZQR2 320 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 DPY19L4Q7Z388 723 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 GALNT4Q8N4A0 578 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 SETD9Q8NE22 299 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 BBS1Q8NFJ9 593 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 ST7LQ8TDW4 575 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 ASB17Q8WXJ9 295 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 MRPL24Q96A35 216 aaKnown RBP16.19■□□□□ 0.18
VPS33A-205ENST00000541169 APOBEC3DQ96AK3 386 aaPredicted RBP16.19■□□□□ 0.18
VPS33A-205ENST00000541169 MYCBPQ99417 103 aaPredicted RBP16.19■□□□□ 0.18
VPS33A-205ENST00000541169 CNN2Q99439 309 aaKnown RBP16.19■□□□□ 0.18
VPS33A-205ENST00000541169 LIME1Q9H400 295 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 PLK3Q9H4B4 646 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 NIPAL2Q9H841 368 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 PLEKHA6Q9Y2H5 1048 aa16.19■□□□□ 0.18
VPS33A-205ENST00000541169 ANKRD17O75179 2603 aaKnown RBP16.19■□□□□ 0.18
VPS33A-205ENST00000541169 PLCE1Q9P212 2302 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 H0YAE9 185 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 OVOL3O00110 214 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 SMPD2O60906 423 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 LCKP06239 509 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 LYNP07948 512 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 ERCC1P07992 297 aaPredicted RBP16.18■□□□□ 0.18
VPS33A-205ENST00000541169 CCL2P13500 99 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 ZNF250P15622 560 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 EIF2B1Q14232 305 aaKnown RBP16.18■□□□□ 0.18
VPS33A-205ENST00000541169 TAF13Q15543 124 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 KRTAP27-1Q3LI81 207 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 ZNF718Q3SXZ3 478 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 DRAM2Q6UX65 266 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 PAQR4Q8N4S7 273 aaPredicted RBP16.18■□□□□ 0.18
VPS33A-205ENST00000541169 DHRSXQ8N5I4 330 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 RNF133Q8WVZ7 376 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 SLAMF6Q96DU3 332 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 MAP6Q96JE9 813 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 FOXC2Q99958 501 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 PNRC2Q9NPJ4 139 aaKnown RBP16.18■□□□□ 0.18
VPS33A-205ENST00000541169 ZNF701Q9NV72 531 aaPredicted RBP16.18■□□□□ 0.18
VPS33A-205ENST00000541169 CLN6Q9NWW5 311 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 SLCO1C1Q9NYB5 712 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 CGGBP1Q9UFW8 167 aaPredicted RBP16.18■□□□□ 0.18
VPS33A-205ENST00000541169 LAMP5Q9UJQ1 280 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 PCDHGB1Q9Y5G3 927 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 HSPE1-MOB4S4R3N1 261 aa16.18■□□□□ 0.18
VPS33A-205ENST00000541169 ROS1P08922 2347 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 CCDC182A6NF36 153 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 H7C417 338 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 MT-ND5P03915 603 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 SOD3P08294 240 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 GCH1P30793 250 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 OTX1P32242 354 aaPredicted RBP16.17■□□□□ 0.18
VPS33A-205ENST00000541169 LIPAP38571 399 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 SWI5Q1ZZU3 235 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 MBNL2Q5VZF2 373 aaKnown RBP16.17■□□□□ 0.18
VPS33A-205ENST00000541169 VHLLQ6RSH7 139 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 OR1J1Q8NGS3 322 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 ABHD4Q8TB40 342 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 SYNPRQ8TBG9 265 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 NRGNQ92686 78 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 ZNF582Q96NG8 517 aaPredicted RBP16.17■□□□□ 0.18
VPS33A-205ENST00000541169 COPS4Q9BT78 406 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 ABHD6Q9BV23 337 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 GSX2Q9BZM3 304 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 BARX1Q9HBU1 254 aaPredicted RBP16.17■□□□□ 0.18
VPS33A-205ENST00000541169 GRIP1Q9Y3R0 1128 aa16.17■□□□□ 0.18
VPS33A-205ENST00000541169 TACC2O95359 2948 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 ZNF254O75437 659 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 CD8AP01732 235 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 FAM157BP0CG42 384 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 ALOX5APP20292 161 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 ATP6V1E1P36543 226 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 KLF3P57682 345 aaPredicted RBP16.16■□□□□ 0.18
VPS33A-205ENST00000541169 PPP1CBP62140 327 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 C11orf71Q6IPW1 123 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 TMEM154Q6P9G4 183 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 LYPD4Q6UWN0 246 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 COLCA1Q6ZS62 124 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.16■□□□□ 0.18
VPS33A-205ENST00000541169 RHOXF1Q8NHV9 184 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 KCNJ15Q99712 375 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 C1QTNF5Q9BXJ0 243 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 MS4A5Q9H3V2 200 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 CENPMQ9NSP4 180 aa16.16■□□□□ 0.18
VPS33A-205ENST00000541169 NKX1-2Q9UD57 310 aaPredicted RBP16.16■□□□□ 0.18
VPS33A-205ENST00000541169 SPG11Q96JI7 2443 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 IGLV3-9A0A075B6K5 115 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 M0R135 149 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 DLGAP1O14490 977 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 SELENOFO60613 162 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 ACSM4P0C7M7 580 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 OR2T7P0C7T2 308 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 HSD11B1P28845 292 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 WNT5AP41221 380 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 MTNR1AP48039 350 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 PPOXP50336 477 aa16.15■□□□□ 0.18
VPS33A-205ENST00000541169 ZMAT1Q5H9K5 638 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms