RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 SLC5A6Q9Y289 635 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 DSPP15924 2871 aaKnown RBP15.54■□□□□ 0.08
CLIP1-215ENST00000541108 LOC110117498-PIK3R3F6TDL0 507 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 SGCEO43556 437 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 APOC1P02654 83 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 ZNF32P17041 273 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 CEACAM8P31997 349 aaPredicted RBP15.54■□□□□ 0.08
CLIP1-215ENST00000541108 TGFBR1P36897 503 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 TGFBR3Q03167 851 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 FOXF2Q12947 444 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 RAB35Q15286 201 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 ACSM3Q53FZ2 586 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 PRR30Q53SZ7 412 aaPredicted RBP15.54■□□□□ 0.08
CLIP1-215ENST00000541108 IL17RDQ8NFM7 739 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 DCLRE1CQ96SD1 692 aaKnown RBP15.54■□□□□ 0.08
CLIP1-215ENST00000541108 MED18Q9BUE0 208 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 MOB1AQ9H8S9 216 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 G6PC2Q9NQR9 355 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 FAM206AQ9NX38 181 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 GALNT8Q9NY28 637 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 ACOD1A6NK06 481 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 IL18BPO95998 194 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 IL1AP01583 271 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 ISG15P05161 165 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 ITGA5P08648 1049 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 MMP7P09237 267 aaPredicted RBP15.53■□□□□ 0.08
CLIP1-215ENST00000541108 TMIGD3P0DMS9 266 aaPredicted RBP15.53■□□□□ 0.08
CLIP1-215ENST00000541108 OTX1P32242 354 aaPredicted RBP15.53■□□□□ 0.08
CLIP1-215ENST00000541108 SERPINB10P48595 397 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 FOXG1P55316 489 aaPredicted RBP15.53■□□□□ 0.08
CLIP1-215ENST00000541108 PSMA6P60900 246 aaKnown RBP15.53■□□□□ 0.08
CLIP1-215ENST00000541108 DGUOKQ16854 277 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 VWA1Q6PCB0 445 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 UNQ9370/PRO34162Q6UXP9 181 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 ZNF704Q6ZNC4 412 aaPredicted RBP15.53■□□□□ 0.08
CLIP1-215ENST00000541108 ZNF676Q8N7Q3 588 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 THRSPQ92748 146 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 STARD4Q96DR4 205 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 WBP1Q96G27 269 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 BOD1Q96IK1 185 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 OR52A1Q9UKL2 312 aa15.53■□□□□ 0.08
CLIP1-215ENST00000541108 SYNGR3O43761 229 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 CGAP01215 116 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 KIR3DL2P43630 455 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 PSG4Q00888 419 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 MFGE8Q08431 387 aaPredicted RBP15.52■□□□□ 0.08
CLIP1-215ENST00000541108 INSL4Q14641 139 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 ZMAT1Q5H9K5 638 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 CEACAM19Q7Z692 300 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 CCDC36Q8IYA8 594 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 OR1K1Q8NGR3 316 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 DACH2Q96NX9 599 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 OR2H1Q9GZK4 316 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 ZNF224Q9NZL3 707 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 ATPIF1Q9UII2 106 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 PROCRQ9UNN8 238 aa15.52■□□□□ 0.08
CLIP1-215ENST00000541108 ARL6IP5O75915 188 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 Q499Y3 187 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 C9orf135Q5VTT2 229 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 BTLAQ7Z6A9 289 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 ELMOD2Q8IZ81 293 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 OR1F12Q8NHA8 337 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 GPR148Q8TDV2 347 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 BCL2L2Q92843 193 aaPredicted RBP15.51■□□□□ 0.07
CLIP1-215ENST00000541108 SPTSSAQ969W0 71 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 SFXN3Q9BWM7 321 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 NUFIP1Q9UHK0 495 aaKnown RBP15.51■□□□□ 0.07
CLIP1-215ENST00000541108 ZGRF1Q86YA3 2104 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 A0A096LPE4 126 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 TRBV5-5A0A0J9YX44 114 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 A0A1W2PPZ6 126 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 OR6C6A6NF89 314 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 ZNF879B4DU55 563 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 DOK2O60496 412 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 GLI4P10075 376 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 HOXB1P14653 301 aaPredicted RBP15.51■□□□□ 0.07
CLIP1-215ENST00000541108 IGHV1-2P23083 117 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 MAPK3P27361 379 aaPredicted RBP15.51■□□□□ 0.07
CLIP1-215ENST00000541108 ARR3P36575 388 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 GALK2Q01415 458 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 RSPO1Q2MKA7 263 aaPredicted RBP15.51■□□□□ 0.07
CLIP1-215ENST00000541108 TMEM244Q5VVB8 128 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 BEND4Q6ZU67 534 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 FGFBP3Q8TAT2 258 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 RGP1Q92546 391 aaPredicted RBP15.51■□□□□ 0.07
CLIP1-215ENST00000541108 TSC22D3Q99576 134 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 GTF2A1LQ9UNN4 478 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 SLC22A13Q9Y226 551 aa15.51■□□□□ 0.07
CLIP1-215ENST00000541108 UBL3O95164 117 aa15.5■□□□□ 0.07
CLIP1-215ENST00000541108 RAF1P04049 648 aa15.5■□□□□ 0.07
CLIP1-215ENST00000541108 UCHL1P09936 223 aa15.5■□□□□ 0.07
CLIP1-215ENST00000541108 UBCP0CG48 685 aaKnown RBP15.5■□□□□ 0.07
CLIP1-215ENST00000541108 COX5AP20674 150 aa15.5■□□□□ 0.07
CLIP1-215ENST00000541108 CRYGSP22914 178 aa15.5■□□□□ 0.07
CLIP1-215ENST00000541108 RPS19P39019 145 aaKnown RBP15.5■□□□□ 0.07
CLIP1-215ENST00000541108 CX3CR1P49238 355 aa15.5■□□□□ 0.07
CLIP1-215ENST00000541108 MTNR1BP49286 362 aa15.5■□□□□ 0.07
CLIP1-215ENST00000541108 PRKXP51817 358 aa15.5■□□□□ 0.07
CLIP1-215ENST00000541108 P2RY6Q15077 328 aa15.5■□□□□ 0.07
CLIP1-215ENST00000541108 BCL2L15Q5TBC7 163 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms