RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ARL9Q6T311 187 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 AMIGO2Q86SJ2 522 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 ZNF786Q8N393 782 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 OR10S1Q8NGN2 331 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 UBASH3BQ8TF42 649 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 LRTOMTQ8WZ04 291 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 PTP4A1Q93096 173 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 DCLRE1CQ96SD1 692 aaKnown RBP14.42□□□□□ -0.1
CD9-209ENST00000540891 CDADC1Q9BWV3 514 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 MED20Q9H944 212 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 ZANQ9Y493 2812 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 SURF4O15260 269 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 ZNF823P16415 610 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 GCH1P30793 250 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 NR4A2P43354 598 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 PSG7Q13046 419 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 PCK2Q16822 640 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 TMEM236Q5W0B7 351 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 TMEM154Q6P9G4 183 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 OR2AJ1Q8NGZ0 328 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 PIMREGQ9BSJ6 248 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 BPESC1Q9GZL8 116 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 SLC25A19Q9HC21 320 aa14.41□□□□□ -0.1
CD9-209ENST00000540891 CSPG4Q6UVK1 2322 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 IGHV4-61A0A0C4DH41 118 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 ZSCAN5BA6NJL1 495 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 EBAG9O00559 213 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 MITFO75030 526 aaPredicted RBP14.4□□□□□ -0.1
CD9-209ENST00000540891 COL8A2P25067 703 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 GIFP27352 417 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 FMO3P31513 532 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 ACTR3P61158 418 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 RIN1Q13671 783 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 COLCA1Q6ZS62 124 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 HIPK1Q86Z02 1210 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 PARP8Q8N3A8 854 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 OR6K6Q8NGW6 343 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 SNX33Q8WV41 574 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 DNAJC9Q8WXX5 260 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 YIPF5Q969M3 257 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 PITX2Q99697 317 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 ATF6BQ99941 703 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 GABARAPL1Q9H0R8 117 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 PAPOLBQ9NRJ5 636 aaKnown RBP14.4□□□□□ -0.1
CD9-209ENST00000540891 GPR160Q9UJ42 338 aa14.4□□□□□ -0.1
CD9-209ENST00000540891 ANK3Q12955 4377 aaKnown RBP14.4□□□□□ -0.1
CD9-209ENST00000540891 G3V2T6 193 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 J3QW42 95 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 IGHV1-46P01743 117 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 SPARCP09486 303 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 ACSM4P0C7M7 580 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 FCGR1AP12314 374 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 USF1P22415 310 aaPredicted RBP14.39□□□□□ -0.11
CD9-209ENST00000540891 TUBG1P23258 451 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 ENTPD1P49961 510 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 ZNF81P51508 661 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 CRISP1P54107 249 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 KPNB1Q14974 876 aaKnown RBP14.39□□□□□ -0.11
CD9-209ENST00000540891 MOGQ16653 247 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 TMEM249Q2WGJ8 235 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 TEX30Q5JUR7 227 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 PLBD1Q6P4A8 553 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 NAA40Q86UY6 237 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 PYDC1Q8WXC3 89 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 TUBG2Q9NRH3 451 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 DDX28Q9NUL7 540 aaKnown RBP14.39□□□□□ -0.11
CD9-209ENST00000540891 NKIRAS2Q9NYR9 191 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 KIF17Q9P2E2 1029 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 ZFHX3Q15911 3703 aa14.39□□□□□ -0.11
CD9-209ENST00000540891 F5H5K5 113 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 H3BNX3 289 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 ZNF593O00488 134 aaPredicted RBP14.38□□□□□ -0.11
CD9-209ENST00000540891 RP2O75695 350 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 GLCEO94923 617 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 HMGN1P05114 100 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 ZNF23P17027 643 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 HOXB4P17483 251 aaPredicted RBP14.38□□□□□ -0.11
CD9-209ENST00000540891 KITLGP21583 273 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 ANOS1P23352 680 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 EPHA2P29317 976 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 RGS6P49758 472 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 BLVRAP53004 296 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 RIPPLY3P57055 190 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 CCL8P80075 99 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 ECH1Q13011 328 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 GGTLC2Q14390 218 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 KDM4DQ6B0I6 523 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 DCXRQ7Z4W1 244 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 ST7LQ8TDW4 575 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 RDH5Q92781 318 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 APOBEC3DQ96AK3 386 aaPredicted RBP14.38□□□□□ -0.11
CD9-209ENST00000540891 OTULINQ96BN8 352 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 HAVCR1Q96D42 359 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 CMBLQ96DG6 245 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 COG8Q96MW5 612 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 C1QTNF5Q9BXJ0 243 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 OR51V1Q9H2C8 321 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 SEMA6AQ9H2E6 1030 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 MARCH7Q9H992 704 aa14.38□□□□□ -0.11
CD9-209ENST00000540891 PTTG3PQ9NZH4 202 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms