RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TP53I3Q53FA7 332 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 OTPQ5XKR4 325 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 DMKNQ6E0U4 476 aaPredicted RBP9.27□□□□□ -0.93
ATL3-204ENST00000540699 CD200R1LQ6Q8B3 271 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 LINGO2Q7L985 606 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 CXorf67Q86X51 503 aaPredicted RBP9.27□□□□□ -0.93
ATL3-204ENST00000540699 ZNF295-AS1Q8N0V1 137 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 ZNF433Q8N7K0 673 aaPredicted RBP9.27□□□□□ -0.93
ATL3-204ENST00000540699 ZFP41Q8N8Y5 198 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 SNX33Q8WV41 574 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 NSMAFQ92636 917 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 TRMT61AQ96FX7 289 aaKnown RBP9.27□□□□□ -0.93
ATL3-204ENST00000540699 MRPL48Q96GC5 212 aaKnown RBP9.27□□□□□ -0.93
ATL3-204ENST00000540699 PGLYRP3Q96LB9 341 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 OR8B4Q96RC9 309 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 MYCBPQ99417 103 aaPredicted RBP9.27□□□□□ -0.93
ATL3-204ENST00000540699 TRIM36Q9NQ86 728 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 KCNN3Q9UGI6 736 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 MRM2Q9UI43 246 aaKnown RBP9.27□□□□□ -0.93
ATL3-204ENST00000540699 LAMP5Q9UJQ1 280 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 STUB1Q9UNE7 303 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 ROS1P08922 2347 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 MTORP42345 2549 aa9.27□□□□□ -0.93
ATL3-204ENST00000540699 SPG11Q96JI7 2443 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 METTL15A6NJ78 407 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 DHHO43323 396 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 PLPP2O43688 288 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 UPK3AO75631 287 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 SULT1C4O75897 302 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 WNT11O96014 354 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 IGHV3-9P01782 118 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 CD1AP06126 327 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 SPARCP09486 303 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 PPP3CBP16298 524 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 PSMA1P25786 263 aaKnown RBP9.26□□□□□ -0.93
ATL3-204ENST00000540699 MPGP29372 298 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 TGFBR1P36897 503 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 TGM4P49221 684 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 FOXG1P55316 489 aaPredicted RBP9.26□□□□□ -0.93
ATL3-204ENST00000540699 VBP1P61758 197 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 LSM3P62310 102 aaKnown RBP9.26□□□□□ -0.93
ATL3-204ENST00000540699 ROM1Q03395 351 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 FAPQ12884 760 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 CDK5R1Q15078 307 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 STK11Q15831 433 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 CCDC58Q4VC31 144 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 C1QTNF12Q5T7M4 302 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 SLC18B1Q6NT16 456 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 GDPGP1Q6ZNW5 385 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 PLEKHG7Q6ZR37 379 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 ABHD12BQ7Z5M8 362 aaPredicted RBP9.26□□□□□ -0.93
ATL3-204ENST00000540699 KCTD20Q7Z5Y7 419 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 C1orf162Q8NEQ5 155 aaPredicted RBP9.26□□□□□ -0.93
ATL3-204ENST00000540699 STEAP2Q8NFT2 490 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 OR6N1Q8NGY5 312 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 ST7LQ8TDW4 575 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 FAM222BQ8WU58 562 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 ASB17Q8WXJ9 295 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 NABP1Q96AH0 204 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 DACH2Q96NX9 599 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 CENPOQ9BU64 300 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 ABHD6Q9BV23 337 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 POLE4Q9NR33 117 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 ACOXLQ9NUZ1 547 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 CYB5R1Q9UHQ9 305 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 GNG8Q9UK08 70 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 GRIP1Q9Y3R0 1128 aa9.26□□□□□ -0.93
ATL3-204ENST00000540699 HEATR1Q9H583 2144 aaKnown RBP9.26□□□□□ -0.93
ATL3-204ENST00000540699 MAP1AP78559 2803 aaPredicted RBP9.26□□□□□ -0.93
ATL3-204ENST00000540699 PNMA8CA0A1B0GUJ8 204 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 A0A1W2PPL8 197 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 TUBAL3A6NHL2 446 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 ZNF587BE7ETH6 402 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 OR8G3PP0DMU2 310 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 ZNF823P16415 610 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 CELP19835 753 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 GALP22466 123 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 CDAP32320 146 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 KIR2DL3P43628 341 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 GBX2P52951 348 aaPredicted RBP9.25□□□□□ -0.93
ATL3-204ENST00000540699 SH3BGRP55822 239 aaPredicted RBP9.25□□□□□ -0.93
ATL3-204ENST00000540699 MRPL28Q13084 256 aaKnown RBP9.25□□□□□ -0.93
ATL3-204ENST00000540699 EIF2B1Q14232 305 aaKnown RBP9.25□□□□□ -0.93
ATL3-204ENST00000540699 DAZAP2Q15038 168 aaPredicted RBP9.25□□□□□ -0.93
ATL3-204ENST00000540699 C22orf34Q6ZV56 151 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 ZNF627Q7L945 461 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 BHLHA15Q7RTS1 189 aaPredicted RBP9.25□□□□□ -0.93
ATL3-204ENST00000540699 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.25□□□□□ -0.93
ATL3-204ENST00000540699 UBE2J2Q8N2K1 259 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 OR52N5Q8NH56 324 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 NDNFQ8TB73 568 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 DYNC2LI1Q8TCX1 351 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 HAVCR2Q8TDQ0 301 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 WFIKKN1Q96NZ8 548 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 ALKBH3Q96Q83 286 aaPredicted RBP9.25□□□□□ -0.93
ATL3-204ENST00000540699 CHCHD6Q9BRQ6 235 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 ULBP2Q9BZM5 246 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 ACTR6Q9GZN1 396 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 RNF167Q9H6Y7 350 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms