RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 IGHV5-51A0A0C4DH38 117 aa11□□□□□ -0.65
NPC1-202ENST00000540608 CPED1A4D0V7 1026 aa11□□□□□ -0.65
NPC1-202ENST00000540608 WIPF3A6NGB9 483 aa11□□□□□ -0.65
NPC1-202ENST00000540608 CCSO14618 274 aa11□□□□□ -0.65
NPC1-202ENST00000540608 TO15178 435 aa11□□□□□ -0.65
NPC1-202ENST00000540608 CSN2P05814 226 aa11□□□□□ -0.65
NPC1-202ENST00000540608 DLSTP36957 453 aa11□□□□□ -0.65
NPC1-202ENST00000540608 FASLGP48023 281 aa11□□□□□ -0.65
NPC1-202ENST00000540608 NR0B1P51843 470 aaKnown RBP11□□□□□ -0.65
NPC1-202ENST00000540608 ATP1B3P54709 279 aa11□□□□□ -0.65
NPC1-202ENST00000540608 DEFA5Q01523 94 aa11□□□□□ -0.65
NPC1-202ENST00000540608 EBPQ15125 230 aaKnown RBP11□□□□□ -0.65
NPC1-202ENST00000540608 LRRC37A5PQ49AS3 106 aa11□□□□□ -0.65
NPC1-202ENST00000540608 RNASE10Q5GAN6 216 aaKnown RBP11□□□□□ -0.65
NPC1-202ENST00000540608 ELP2Q6IA86 826 aa11□□□□□ -0.65
NPC1-202ENST00000540608 FJX1Q86VR8 437 aa11□□□□□ -0.65
NPC1-202ENST00000540608 ACBD4Q8NC06 268 aa11□□□□□ -0.65
NPC1-202ENST00000540608 RLN3Q8WXF3 142 aa11□□□□□ -0.65
NPC1-202ENST00000540608 ZNF471Q9BX82 626 aaPredicted RBP11□□□□□ -0.65
NPC1-202ENST00000540608 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 C9orf170A2RU37 121 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 RAB27BO00194 218 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 SMAD9O15198 467 aaKnown RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 ZNF823P16415 610 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 OR1D4P47884 311 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 MC2RQ01718 297 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 PPP1R1AQ13522 171 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 BEX5Q5H9J7 111 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 TMEM244Q5VVB8 128 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 HLA-DQA1Q5Y7H0 255 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 C9orf40Q8IXQ3 194 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 CLRN3Q8NCR9 226 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 MRGPRFQ96AM1 343 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 KLHDC7BQ96G42 594 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 ZNF416Q9BWM5 594 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 PIGMQ9H3S5 423 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 GAREM1Q9H706 876 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 UCK1Q9HA47 277 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 PCDHB16Q9NRJ7 776 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 PLEKHA6Q9Y2H5 1048 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 TMEM269A0A1B0GVZ9 245 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 ABCD4O14678 606 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 LMX1BO60663 402 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 LIPCP11150 499 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 RAB3AP20336 220 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 GFERP55789 205 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 SLC26A5P58743 744 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 PPIAP62937 165 aaKnown RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 ZP2Q05996 745 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 PLCXD2Q0VAA5 305 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 SNTB1Q13884 538 aaKnown RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 ELAVL1Q15717 326 aaKnown RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 PCK2Q16822 640 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 FAHD2BQ6P2I3 314 aaPredicted RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 UQCC3Q6UW78 93 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 GRINAQ7Z429 371 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 DCXRQ7Z4W1 244 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 TRAPPC6BQ86SZ2 158 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 CCDC36Q8IYA8 594 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 TMEM185AQ8NFB2 350 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 SLC26A10Q8NG04 563 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 GPR119Q8TDV5 335 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 ST7LQ8TDW4 575 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 NKD1Q969G9 470 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 FAHD2AQ96GK7 314 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 TGM7Q96PF1 710 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 PHB2Q99623 299 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 NPAS1Q99742 590 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 CST11Q9H112 138 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 CNTD2Q9H8S5 307 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 CPAMD8Q8IZJ3 1885 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 A0A1W2PPC4 97 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 EIF1AYO14602 144 aaKnown RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 SIGLEC5O15389 551 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 OR2T1O43869 369 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 AHSA1O95433 338 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 CASRP41180 1078 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 EIF1AXP47813 144 aaKnown RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 IL13RA1P78552 427 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 SIGLEC14Q08ET2 396 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 KIF26BQ2KJY2 2108 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 PRAMEF17Q5VTA0 474 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 DEGS2Q6QHC5 323 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 TTLL10Q6ZVT0 673 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 PAQR4Q8N4S7 273 aaPredicted RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 ZNF248Q8NDW4 579 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 OR5T2Q8NGG2 359 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 THAP6Q8TBB0 222 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 MARC2Q969Z3 335 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 NKX6-2Q9C056 277 aaPredicted RBP10.99□□□□□ -0.65
NPC1-202ENST00000540608 FAM117AQ9C073 453 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 CHRNA10Q9GZZ6 450 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 CUTCQ9NTM9 273 aa10.99□□□□□ -0.65
NPC1-202ENST00000540608 SULT2B1O00204 365 aa10.98□□□□□ -0.65
NPC1-202ENST00000540608 NDUFA2O43678 99 aa10.98□□□□□ -0.65
NPC1-202ENST00000540608 PLATP00750 562 aa10.98□□□□□ -0.65
NPC1-202ENST00000540608 IGLV3-19P01714 112 aa10.98□□□□□ -0.65
NPC1-202ENST00000540608 HLA-DOBP13765 273 aa10.98□□□□□ -0.65
NPC1-202ENST00000540608 BDKRB2P30411 391 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms