RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SERGEFQ9UGK8 458 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 PLXNB3Q9ULL4 1909 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF727A8MUV8 499 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 B4E171 279 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 SPINT1O43278 529 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 B4GALT2O60909 372 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 NSA2O95478 260 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 TRGC1P0CF51 173 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 HNF1AP20823 631 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ACRV1P26436 265 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 BUD31P41223 144 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 P2RY2P41231 377 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 PDX1P52945 283 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 SNRPNP63162 240 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 RASGEF1BQ0VAM2 473 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 KCNMB1Q16558 191 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF343Q6P1L6 599 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ERN2Q76MJ5 926 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 HSD11B1LQ7Z5J1 315 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 GABRG1Q8N1C3 465 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF283Q8N7M2 679 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 OR14K1Q8NGZ2 314 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 PELI1Q96FA3 418 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 DIRC2Q96SL1 478 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 PLA2G2EQ9NZK7 142 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 WNT16Q9UBV4 365 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ETV7Q9Y603 341 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 COL4A2P08572 1712 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 MUC22E2RYF6 1773 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 TRBV2A0A0J9YWF9 115 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 A0A1W2PP55 124 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC22A31A6NKX4 558 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 CPSF4LA6NMK7 179 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 H0YIZ8 118 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 M0QYG6 137 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 C8GP07360 202 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 TLX1P31314 330 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 PPICP45877 212 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 OR3A1P47881 315 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 CCR4P51679 360 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 CARD18P57730 90 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 LTBQ06643 244 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 ELOBQ15370 118 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 GUK1Q16774 197 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 AWAT2Q6E213 333 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 EIF5AL1Q6IS14 154 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 Q6ZVL8 140 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 TIPARPQ7Z3E1 657 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 DND1Q8IYX4 353 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 OR13C3Q8NGS6 347 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 ABHD5Q8WTS1 349 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 ASB11Q8WXH4 323 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 MRI1Q9BV20 369 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 POTEKPQ9BYX7 375 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 FOXQ1Q9C009 403 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 TAAR2Q9P1P5 351 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 FRS3O43559 492 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 AMY2AP04746 511 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 PTNP21246 168 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 ZBTB25P24278 435 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 PPP2R1BP30154 601 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 NTSP30990 170 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 THBS4P35443 961 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 IGFALSP35858 605 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 SNCAP37840 140 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 SPINT3P49223 89 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 AFF3P51826 1226 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 SKP1P63208 163 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 SIRPAP78324 504 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 GAS6Q14393 721 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 RAB35Q15286 201 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 NCR3LG1Q68D85 454 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF774Q6NX45 483 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 NRMQ8IXM6 262 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 ACOT4Q8N9L9 421 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 OR9A4Q8NGU2 314 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 LYPD6BQ8NI32 183 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 RNASEH2CQ8TDP1 164 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 FRZBQ92765 325 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 KLK6Q92876 244 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 SCAMP4Q969E2 229 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 G6PC3Q9BUM1 346 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 GPR174Q9BXC1 333 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 SRMSQ9H3Y6 488 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 MYNNQ9NPC7 610 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 GLRX2Q9NS18 164 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 CRLS1Q9UJA2 301 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 ATG4BQ9Y4P1 393 aa8.53□□□□□ -1.04
CTNNA1-243ENST00000540387 C13orf42A0A1B0GVH6 325 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 C5orf51A6NDU8 294 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 M0QZK8 103 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 CDC42EP2O14613 210 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 KLF4O43474 513 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 TGOLN2O43493 480 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 GMFGO60234 142 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 CDC14BO60729 498 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 TSPAN15O95858 294 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 GPANK1O95872 356 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 ZGLP1P0C6A0 271 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 ELFN1P0C7U0 828 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms