RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 GPR85P60893 370 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 RLN3Q8WXF3 142 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 S100PBPQ96BU1 408 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 JSRP1Q96MG2 331 aaPredicted RBP11.69□□□□□ -0.54
MSH6-210ENST00000540021 OR8B4Q96RC9 309 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 URM1Q9BTM9 101 aaKnown RBP11.69□□□□□ -0.54
MSH6-210ENST00000540021 ZFP57Q9NU63 452 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 LRP12Q9Y561 859 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 NPTNQ9Y639 398 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 KIF26BQ2KJY2 2108 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 ICOSLGO75144 302 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 CSTBP04080 98 aaKnown RBP11.68□□□□□ -0.54
MSH6-210ENST00000540021 LPCAT3Q6P1A2 487 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 C19orf47Q8N9M1 422 aaKnown RBP11.68□□□□□ -0.54
MSH6-210ENST00000540021 OR1M1Q8NGA1 313 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 SLAMF9Q96A28 289 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 LRFN5Q96NI6 719 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 SCPEP1Q9HB40 452 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 PDE7BQ9NP56 450 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 TMED7-TICAM2A0A0A6YYA0 188 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 ZNF726A6NNF4 738 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 ZNF850A8MQ14 1090 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 C17orf51A8MQB3 221 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 F5H5K5 113 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 SPP1P10451 314 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 GABRR1P24046 479 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 EGR3Q06889 387 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 GLIPR1L1Q6UWM5 242 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 SLC43A2Q8N370 569 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 TSLPQ969D9 159 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 PARPBPQ9NWS1 579 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 PUS1Q9Y606 427 aaKnown RBP eCLIP11.68□□□□□ -0.54
MSH6-210ENST00000540021 TRPM7Q96QT4 1865 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 LRP3O75074 770 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 GP1BAP07359 652 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 SFTPDP35247 375 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 RPL27P61353 136 aaKnown RBP11.68□□□□□ -0.54
MSH6-210ENST00000540021 MFGE8Q08431 387 aaPredicted RBP11.68□□□□□ -0.54
MSH6-210ENST00000540021 TOMM34Q15785 309 aaPredicted RBP11.68□□□□□ -0.54
MSH6-210ENST00000540021 MOGAT2Q3SYC2 334 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 ZNF529Q6P280 563 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 C7orf61Q8IZ16 206 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 FAM160A2Q8N612 972 aaPredicted RBP11.68□□□□□ -0.54
MSH6-210ENST00000540021 ANKRD9Q96BM1 317 aaPredicted RBP11.68□□□□□ -0.54
MSH6-210ENST00000540021 USB1Q9BQ65 265 aaKnown RBP11.68□□□□□ -0.54
MSH6-210ENST00000540021 RPP25Q9BUL9 199 aaKnown RBP11.68□□□□□ -0.54
MSH6-210ENST00000540021 SLCO5A1Q9H2Y9 848 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 UNC13CQ8NB66 2214 aa11.68□□□□□ -0.54
MSH6-210ENST00000540021 PRSS37A4D1T9 235 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 K7EPK0 472 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 CYR61O00622 381 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 ABCD4O14678 606 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 ZNF749O43361 778 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 NME2P1O60361 137 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 SNRNP200O75643 2136 aaKnown RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 IL10RAQ13651 578 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 IGSF11Q5DX21 431 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 ZNF595Q8IYB9 648 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 FAM71E2Q8N5Q1 922 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 TMEM229BQ8NBD8 167 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 HSD17B11Q8NBQ5 300 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 AKR1E2Q96JD6 320 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 REG4Q9BYZ8 158 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 CHRDQ9H2X0 955 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 RHOFQ9HBH0 211 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 TAF9BQ9HBM6 251 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 TRAV36DV7A0A075B6V5 113 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 WRBO00258 174 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 CELA2BP08218 269 aaPredicted RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 OR8U9P0C7N5 309 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 CTLA4P16410 223 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 S100A2P29034 98 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 SNU13P55769 128 aaKnown RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 TAS2R31P59538 309 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 NAA40Q86UY6 237 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 STX12Q86Y82 276 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 PGAM5Q96HS1 289 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 WDR77Q9BQA1 342 aaPredicted RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 NUDT9Q9BW91 350 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 TMEM59Q9BXS4 323 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 PURGQ9UJV8 347 aaKnown RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 RAB22AQ9UL26 194 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 MRPS28Q9Y2Q9 187 aaKnown RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 RNF215Q9Y6U7 377 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 C9orf170A2RU37 121 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 TTLL8A6PVC2 850 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 UPK3AO75631 287 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 CRYBA1P05813 215 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 DHPSP49366 369 aaPredicted RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 SPIN3Q5JUX0 258 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 PARM1Q6UWI2 310 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 NPSR1Q6W5P4 371 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 ADAD2Q8NCV1 583 aaKnown RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 FNDC9Q8TBE3 224 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 ST7LQ8TDW4 575 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 KLHDC7BQ96G42 594 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 SFXN1Q9H9B4 322 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 SULT1C2O00338 296 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 SEMA4FO95754 770 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms