RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 RNFT2Q96EX2 444 aa13.46□□□□□ -0.26
DDB1-216ENST00000539739 GON7Q9BXV9 100 aa13.46□□□□□ -0.26
DDB1-216ENST00000539739 AMBNQ9NP70 447 aa13.46□□□□□ -0.26
DDB1-216ENST00000539739 B3GNT2Q9NY97 397 aa13.46□□□□□ -0.26
DDB1-216ENST00000539739 DAPK2Q9UIK4 370 aa13.46□□□□□ -0.26
DDB1-216ENST00000539739 FBXL3Q9UKT7 428 aa13.46□□□□□ -0.26
DDB1-216ENST00000539739 NUP50Q9UKX7 468 aa13.46□□□□□ -0.26
DDB1-216ENST00000539739 MYRFQ9Y2G1 1151 aa13.46□□□□□ -0.26
DDB1-216ENST00000539739 LHFPL6Q9Y693 200 aa13.46□□□□□ -0.26
DDB1-216ENST00000539739 HCFC1P51610 2035 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 C19orf84I3L1E1 186 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 MMP7P09237 267 aaPredicted RBP13.45□□□□□ -0.26
DDB1-216ENST00000539739 SBK2P0C263 348 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 DBTP11182 482 aaKnown RBP13.45□□□□□ -0.26
DDB1-216ENST00000539739 CBR1P16152 277 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 AP2S1P53680 142 aaPredicted RBP13.45□□□□□ -0.26
DDB1-216ENST00000539739 CSNK2BP67870 215 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 SMN1Q16637 294 aaKnown RBP13.45□□□□□ -0.26
DDB1-216ENST00000539739 PCK2Q16822 640 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 KLHL22Q53GT1 634 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 C6orf141Q5SZD1 244 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 WFDC8Q8IUA0 241 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 FAM169BQ8N8A8 192 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 ZNF454Q8N9F8 522 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 FGFBP3Q8TAT2 258 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 C1orf198Q9H425 327 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 ADGRL4Q9HBW9 690 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 LAMP5Q9UJQ1 280 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 GDF2Q9UK05 429 aaPredicted RBP13.45□□□□□ -0.26
DDB1-216ENST00000539739 PCDHGB1Q9Y5G3 927 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 TMEM14AQ9Y6G1 99 aa13.45□□□□□ -0.26
DDB1-216ENST00000539739 IQCMA0A1B0GVH7 501 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 IRGMA1A4Y4 181 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 A1L4Q6 167 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 ZNF503-AS2A6NEH8 195 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 SGCEO43556 437 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 PTHP01270 115 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 IGFBP2P18065 325 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 RPS27P42677 84 aaKnown RBP13.44□□□□□ -0.26
DDB1-216ENST00000539739 CXCR4P61073 352 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 S100A12P80511 92 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 EIF2B1Q14232 305 aaKnown RBP13.44□□□□□ -0.26
DDB1-216ENST00000539739 SLC18B1Q6NT16 456 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 CORO6Q6QEF8 472 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 C22orf34Q6ZV56 151 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 AKAP14Q86UN6 197 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 DMRTC2Q8IXT2 367 aaPredicted RBP13.44□□□□□ -0.26
DDB1-216ENST00000539739 ELMOD2Q8IZ81 293 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 BPIFB6Q8NFQ5 453 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 OTOSQ8NHW6 89 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 C12orf43Q96C57 262 aaKnown RBP13.44□□□□□ -0.26
DDB1-216ENST00000539739 MNTQ99583 582 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 C1QTNF6Q9BXI9 259 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 OR2H1Q9GZK4 316 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 PLEK2Q9NYT0 353 aa13.44□□□□□ -0.26
DDB1-216ENST00000539739 SPTAN1Q13813 2472 aaKnown RBP13.44□□□□□ -0.26
DDB1-216ENST00000539739 RER1O15258 196 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 CLDN1O95832 211 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 FADS2O95864 444 aaKnown RBP13.43□□□□□ -0.26
DDB1-216ENST00000539739 IGKV3-15P01624 115 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 THBDP07204 575 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 EPXP11678 715 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 RCVRNP35243 200 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 BMXP51813 675 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 PSG4Q00888 419 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 RAB40BQ12829 278 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 C3orf36Q3SXR2 165 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 PABPC1L2AQ5JQF8 200 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 MEX3BQ6ZN04 569 aaKnown RBP13.43□□□□□ -0.26
DDB1-216ENST00000539739 DCXRQ7Z4W1 244 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 CDC20BQ86Y33 519 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 SLC35F2Q8IXU6 374 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 FAM222BQ8WU58 562 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 THEM6Q8WUY1 208 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 SGCDQ92629 289 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 LGALS12Q96DT0 336 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 SLA2Q9H6Q3 261 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 SP140LQ9H930 580 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 SCPEP1Q9HB40 452 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 HMG20AQ9NP66 347 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 PLCXD1Q9NUJ7 323 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 MRPS18AQ9NVS2 196 aaKnown RBP13.43□□□□□ -0.26
DDB1-216ENST00000539739 SCN3BQ9NY72 215 aa13.43□□□□□ -0.26
DDB1-216ENST00000539739 FASNP49327 2511 aaKnown RBP13.43□□□□□ -0.26
DDB1-216ENST00000539739 ANKHD1Q8IWZ3 2542 aaKnown RBP13.43□□□□□ -0.26
DDB1-216ENST00000539739 EFCAB10A6NFE3 127 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 FAM25AB3EWG3 89 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 FAM25CB3EWG5 89 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 FAM25GB3EWG6 89 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 ZNF670-ZNF695F2Z2N8 137 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 PHYHO14832 338 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 SULT1B1O43704 296 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 DOK2O60496 412 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 FAM20BO75063 409 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 APOL3O95236 402 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 SERPINA5P05154 406 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 OR2T7P0C7T2 308 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 ZNF83P51522 516 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 IDH3GP51553 393 aaPredicted RBP13.42□□□□□ -0.26
DDB1-216ENST00000539739 RAB39AQ14964 217 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms