RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 PNPP00491 289 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 HLA-HP01893 362 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 DCTDP32321 178 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 PRKXP51817 358 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 LSM3P62310 102 aaKnown RBP14.12□□□□□ -0.15
TRAF3-204ENST00000539721 MFGE8Q08431 387 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-204ENST00000539721 GABRA6Q16445 453 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 TMEM53Q6P2H8 277 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 FDX2Q6P4F2 183 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 DPPA2Q7Z7J5 298 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 LUZP2Q86TE4 346 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 RND1Q92730 232 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 GHSRQ92847 366 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 C12orf43Q96C57 262 aaKnown RBP14.12□□□□□ -0.15
TRAF3-204ENST00000539721 PGLYRP3Q96LB9 341 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 C4orf45Q96LM5 186 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 KCNJ15Q99712 375 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 WNT5BQ9H1J7 359 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 EXOSC4Q9NPD3 245 aaKnown RBP14.12□□□□□ -0.15
TRAF3-204ENST00000539721 FRRS1LQ9P0K9 344 aa14.12□□□□□ -0.15
TRAF3-204ENST00000539721 ZNF629Q9UEG4 869 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-204ENST00000539721 RP1L1Q8IWN7 2480 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-204ENST00000539721 TMEM269A0A1B0GVZ9 245 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 EEF1E1-BLOC1S5C9J1V9 151 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 LOC110117498-PIK3R3F6TDL0 507 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 H3BMQ9 156 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 ZNF701M0R085 212 aaPredicted RBP14.11□□□□□ -0.15
TRAF3-204ENST00000539721 MSTNO14793 375 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 EEF1E1O43324 174 aaKnown RBP14.11□□□□□ -0.15
TRAF3-204ENST00000539721 SYNGR3O43761 229 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 SRSF10O75494 262 aaKnown RBP14.11□□□□□ -0.15
TRAF3-204ENST00000539721 UBL3O95164 117 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 CD1AP06126 327 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 CD53P19397 219 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 ARR3P36575 388 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 CRYBB2P43320 205 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 TUBA1BP68363 451 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 GALK2Q01415 458 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 MRPL49Q13405 166 aaKnown RBP14.11□□□□□ -0.15
TRAF3-204ENST00000539721 P2RY6Q15077 328 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 TSC22D1Q15714 1073 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 CTF1Q16619 201 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 PABPC1L2AQ5JQF8 200 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 WDR38Q5JTN6 314 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 ZNF474Q6S9Z5 364 aaPredicted RBP14.11□□□□□ -0.15
TRAF3-204ENST00000539721 TUBA1AQ71U36 451 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 CATSPERDQ86XM0 798 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 PRSS35Q8N3Z0 413 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 ZNF283Q8N7M2 679 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 C1orf162Q8NEQ5 155 aaPredicted RBP14.11□□□□□ -0.15
TRAF3-204ENST00000539721 OR1F12Q8NHA8 337 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 RPS4Y2Q8TD47 263 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 DOK1Q99704 481 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 PDCD1LG2Q9BQ51 273 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 BCL7BQ9BQE9 202 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 SSR3Q9UNL2 185 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 ZNF503-AS2A6NEH8 195 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 CCL21O00585 134 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 DVL2O14641 736 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 GPRIN2O60269 458 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 GPX5O75715 221 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 HLA-DPB1P04440 258 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 HOXC12P31275 282 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 KIR3DL2P43630 455 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 HTR5AP47898 357 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 CX3CR1P49238 355 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 CCR9P51686 369 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 PSMA6P60900 246 aaKnown RBP14.11□□□□□ -0.15
TRAF3-204ENST00000539721 UBE2NP61088 152 aaKnown RBP14.11□□□□□ -0.15
TRAF3-204ENST00000539721 RAB1AP62820 205 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 ECH1Q13011 328 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 TRAM1Q15629 374 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 ALDH16A1Q8IZ83 802 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 OR5AK2Q8NH90 309 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 SPTSSAQ969W0 71 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 COQ7Q99807 217 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 COMMD4Q9H0A8 199 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 BRD7Q9NPI1 651 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 FAM206AQ9NX38 181 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 CACNA1BQ00975 2339 aa14.11□□□□□ -0.15
TRAF3-204ENST00000539721 OR6C6A6NF89 314 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 OR4C45A6NMZ5 311 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 F5H5K5 113 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 MMP16P51512 607 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 VBP1P61758 197 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 FABP5Q01469 135 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 ODF4Q2M2E3 257 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 SFRP5Q5T4F7 317 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 BCL2L15Q5TBC7 163 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 BHLHA15Q7RTS1 189 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-204ENST00000539721 MRGPRGQ86SM5 289 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 CCDC36Q8IYA8 594 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 MS4A15Q8N5U1 240 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 ZNF676Q8N7Q3 588 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 SLC7A6Q92536 515 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 HDHD5Q9BXW7 423 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 NOX3Q9HBY0 568 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 G6PC2Q9NQR9 355 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 OR52A1Q9UKL2 312 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 SLC22A13Q9Y226 551 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms