RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TSSK2Q96PF2 358 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 OR5M11Q96RB7 305 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 CHCHD6Q9BRQ6 235 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 MED20Q9H944 212 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 WDR76Q9H967 626 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 MARCH7Q9H992 704 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 AKIP1Q9NQ31 210 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 ERVK13-1Q9NX77 482 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 BABAM2Q9NXR7 383 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 ATPIF1Q9UII2 106 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 LAMP5Q9UJQ1 280 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 HCFC1P51610 2035 aa8.98□□□□□ -0.97
CLPB-210ENST00000539148 HEATR1Q9H583 2144 aaKnown RBP8.98□□□□□ -0.97
CLPB-210ENST00000539148 DAPL1A0PJW8 107 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 FAM90A27PA6NNH2 459 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 J3QRE1 110 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 ZNF593O00488 134 aaPredicted RBP8.97□□□□□ -0.97
CLPB-210ENST00000539148 ZG16O60844 167 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 ZNF254O75437 659 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 RAD51DO75771 328 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 ITGA5P08648 1049 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 SPARCP09486 303 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 SBK2P0C263 348 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 LIMS3P0CW19 117 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 LIMS4P0CW20 117 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 B4GALT1P15291 398 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 PTBP1P26599 531 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLPB-210ENST00000539148 ETV1P50549 477 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 TAF13Q15543 124 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 GSG1Q2KHT4 349 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 C3orf36Q3SXR2 165 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 TBRG1Q3YBR2 411 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 CCDC58Q4VC31 144 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 PHYHD1Q5SRE7 291 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 C9orf135Q5VTT2 229 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 DEGS2Q6QHC5 323 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 ZNF474Q6S9Z5 364 aaPredicted RBP8.97□□□□□ -0.97
CLPB-210ENST00000539148 STAC2Q6ZMT1 411 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 PLEKHG7Q6ZR37 379 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.97□□□□□ -0.97
CLPB-210ENST00000539148 C1orf174Q8IYL3 243 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 FAM169BQ8N8A8 192 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 OR51L1Q8NGJ5 315 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 OR51G2Q8NGK0 314 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 SSC4DQ8WTU2 575 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 CHPT1Q8WUD6 406 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 ACOT12Q8WYK0 555 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 BCL2L2Q92843 193 aaPredicted RBP8.97□□□□□ -0.97
CLPB-210ENST00000539148 ZMYND19Q96E35 227 aaPredicted RBP8.97□□□□□ -0.97
CLPB-210ENST00000539148 KCNS3Q9BQ31 491 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 MROQ9BYG7 248 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 ACTR6Q9GZN1 396 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 HDHD2Q9H0R4 259 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 NIPAL2Q9H841 368 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 SLC17A5Q9NRA2 495 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 ADAM30Q9UKF2 790 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 KLF2Q9Y5W3 355 aaPredicted RBP8.97□□□□□ -0.97
CLPB-210ENST00000539148 LRRK2Q5S007 2527 aa8.97□□□□□ -0.97
CLPB-210ENST00000539148 TUBAL3A6NHL2 446 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 FAM171A2A8MVW0 826 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 M0R129 80 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 DCTN6O00399 190 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 SGCEO43556 437 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 GOSR1O95249 250 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 COX5BP10606 129 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 CLUP10909 449 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 CD79AP11912 226 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 CDAP32320 146 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 OPRL1P41146 370 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 CRYBB2P43320 205 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 DEFA1P59665 94 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 DEFA3P59666 94 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 LSM3P62310 102 aaKnown RBP8.96□□□□□ -0.98
CLPB-210ENST00000539148 RAB1AP62820 205 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 GRB2P62993 217 aaKnown RBP8.96□□□□□ -0.98
CLPB-210ENST00000539148 EGR3Q06889 387 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 PPA1Q15181 289 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 ETFDHQ16134 617 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 SSX1Q16384 188 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 PCK2Q16822 640 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 LINC01590Q5TEZ4 76 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 MZT2AQ6P582 158 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 ZNF322Q6U7Q0 402 aaPredicted RBP8.96□□□□□ -0.98
CLPB-210ENST00000539148 FAM220AQ7Z4H9 259 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 TPRA1Q86W33 373 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 LIX1LQ8IVB5 337 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 SLC35F2Q8IXU6 374 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 TIGD4Q8IY51 512 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 LRRC18Q8N456 261 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 ZNF511Q8NB15 262 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 ZNF485Q8NCK3 441 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 BBS1Q8NFJ9 593 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 OTOSQ8NHW6 89 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 THEM6Q8WUY1 208 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 SNX33Q8WV41 574 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 ITLN2Q8WWU7 325 aaPredicted RBP8.96□□□□□ -0.98
CLPB-210ENST00000539148 C11orf40Q8WZ69 217 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 SPTSSAQ969W0 71 aa8.96□□□□□ -0.98
CLPB-210ENST00000539148 KCTD12Q96CX2 325 aaKnown RBP8.96□□□□□ -0.98
CLPB-210ENST00000539148 COX4I2Q96KJ9 171 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms