RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 DISC1C4P0D8 188 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 M0R1B8 84 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 RAMP1O60894 148 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 DUX4L2P0CJ85 424 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 DUX4L3P0CJ86 424 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 DUX4L4P0CJ87 422 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 DUX4L5P0CJ88 424 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 DUX4L6P0CJ89 424 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 DUX4L7P0CJ90 424 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 HLA-DOBP13765 273 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 SOX18P35713 384 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 ZNF83P51522 516 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 FAM27E3Q08E93 113 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 VASNQ6EMK4 673 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 OR2A2Q6IF42 318 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 PLBD1Q6P4A8 553 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 VWA1Q6PCB0 445 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 SLC16A14Q7RTX9 510 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 DPPA2Q7Z7J5 298 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 LIX1LQ8IVB5 337 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 ZNF843Q8N446 348 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 OR2T35Q8NGX2 323 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 OR5K1Q8NHB7 308 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 RNASE11Q8TAA1 199 aaKnown RBP7.82□□□□□ -1.16
GGA3-202ENST00000538886 ZNF385AQ96PM9 386 aaKnown RBP7.82□□□□□ -1.16
GGA3-202ENST00000538886 TSNAXQ99598 290 aaKnown RBP7.82□□□□□ -1.16
GGA3-202ENST00000538886 PLEK2Q9NYT0 353 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 DUX4Q9UBX2 424 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 CMAHPQ9Y471 501 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 USP9XQ93008 2570 aaPredicted RBP7.82□□□□□ -1.16
GGA3-202ENST00000538886 A0A087WUJ7 227 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 A0A1B0GUH1 482 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 RRASP10301 218 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 HOXB1P14653 301 aaPredicted RBP7.82□□□□□ -1.16
GGA3-202ENST00000538886 LCN1P31025 176 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 CDAP32320 146 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 SELENOPP49908 381 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 CEACAM16Q2WEN9 425 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 H3F3CQ6NXT2 135 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 SLC43A2Q8N370 569 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 ZNF610Q8N9Z0 462 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 FAM57AQ8TBR7 257 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 FCGR1BQ92637 280 aa7.82□□□□□ -1.16
GGA3-202ENST00000538886 CFAP46Q8IYW2 2715 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 A0A0B4J2E0 115 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 A0A1B0GX12 115 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 OR6C65A6NJZ3 312 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 AHRRA9YTQ3 701 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 DOK2O60496 412 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 WDR1O75083 606 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 KHDRBS3O75525 346 aaKnown RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 QDPRP09417 244 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 ZP3P21754 424 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 FOXF2Q12947 444 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 HNRNPA0Q13151 305 aaKnown RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 SEC23BQ15437 767 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 ZNF691Q5VV52 312 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 SLC27A4Q6P1M0 643 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 IGFL3Q6UXB1 125 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 SHFQ7M4L6 423 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 ZNF227Q86WZ6 799 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 CALHM3Q86XJ0 350 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 Q8NA96 180 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 BEST4Q8NFU0 473 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 OR52N1Q8NH53 320 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 MARVELD3Q96A59 401 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 ZMYND19Q96E35 227 aaPredicted RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 JMJD1CQ15652 2540 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 PLCE1Q9P212 2302 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 A0A1W2PQL4 384 aaPredicted RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 E9PI62 339 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 L7N2F9 121 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 LYRM1O43325 122 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 NR2C1P13056 603 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 PSMA1P25786 263 aaKnown RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 PCBP3P57721 371 aaKnown RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 PRPS1P60891 318 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 ALKBH1Q13686 389 aaKnown RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 FNDC7Q5VTL7 733 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 SHQ1Q6PI26 577 aaKnown RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 HEATR5AQ86XA9 2040 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 LINC00346Q8IVM7 164 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 SVOPLQ8N434 492 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 C9orf106Q8NAJ2 232 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 NIPSNAP1Q9BPW8 284 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 SRXN1Q9BYN0 137 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 TAS2R16Q9NYV7 291 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 NTMQ9P121 344 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 TNRC6BQ9UPQ9 1833 aaKnown RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 HEATR1Q9H583 2144 aaKnown RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 A0A0A6YYJ9 748 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 GCM2O75603 506 aaPredicted RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 RGS11O94810 467 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 WISP1O95388 367 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 SLC2A10O95528 541 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 RAB36O95755 333 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 APEHP13798 732 aaKnown RBP7.81□□□□□ -1.16
GGA3-202ENST00000538886 MAKP20794 623 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 GSTM3P21266 225 aa7.81□□□□□ -1.16
GGA3-202ENST00000538886 PTAFRP25105 342 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms