RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PTGS2P35354 604 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 H2BFSP57053 126 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 RAP1BP61224 184 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 RAP1AP62834 184 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 GUSBP11Q6P575 273 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 PLXDC1Q8IUK5 500 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 GABRG1Q8N1C3 465 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 MUC20Q8N307 709 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-207ENST00000538862 PLPP7Q8NBV4 271 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 PLPP5Q8NEB5 264 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 OR5M1Q8NGP8 315 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 TMEM234Q8WY98 164 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 C1orf198Q9H425 327 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 MED9Q9NWA0 146 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 SEMA5BQ9P283 1151 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 HHLA2Q9UM44 414 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 COA3Q9Y2R0 106 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-207ENST00000538862 MSRB2Q9Y3D2 182 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 PCDHGA1Q9Y5H4 931 aa13.01□□□□□ -0.33
CDCA3-207ENST00000538862 FTCDNL1E5RQL4 147 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 HRGP04196 525 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 ZNF250P15622 560 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 CAPZA1P52907 286 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 OR1D5P58170 312 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 GMFBP60983 142 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 HLXQ14774 488 aaPredicted RBP13□□□□□ -0.33
CDCA3-207ENST00000538862 MFSD13AQ14CX5 517 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 PCK2Q16822 640 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 PRAMEF17Q5VTA0 474 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 OTPQ5XKR4 325 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 DNM1P34Q6PK57 102 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 DEGS2Q6QHC5 323 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 TMPRSS7Q7RTY8 843 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 ZSCAN2Q7Z7L9 614 aaPredicted RBP13□□□□□ -0.33
CDCA3-207ENST00000538862 DUSP19Q8WTR2 217 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 CCDC107Q8WV48 283 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 PCNPQ8WW12 178 aaKnown RBP13□□□□□ -0.33
CDCA3-207ENST00000538862 PTX4Q96A99 478 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 SEH1LQ96EE3 360 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 WDR89Q96FK6 387 aaPredicted RBP13□□□□□ -0.33
CDCA3-207ENST00000538862 SLC25A44Q96H78 314 aaPredicted RBP13□□□□□ -0.33
CDCA3-207ENST00000538862 SLC25A21Q9BQT8 299 aaPredicted RBP13□□□□□ -0.33
CDCA3-207ENST00000538862 VN1R1Q9GZP7 353 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 TAS2R4Q9NYW5 299 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 MKL2Q9ULH7 1088 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 IGHV1OR21-1A0A087WYE8 117 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 A0A1B0GX78 115 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 NPIPB13A6NJU9 1138 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 NPIPB4C9JG80 1138 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 LDLRAD4O15165 306 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 ZZEF1O43149 2961 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 DOK2O60496 412 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 RAD1O60671 282 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 AQP8O94778 261 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 PMS2P2O95744 297 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 PPP3CBP16298 524 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 ZNF823P16415 610 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 ACHEP22303 614 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 GLYATL3Q5SZD4 288 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 HES3Q5TGS1 186 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 TMEM205Q6UW68 189 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 UNQ6494/PRO21346Q6UXR6 183 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 ZNF704Q6ZNC4 412 aaPredicted RBP13□□□□□ -0.33
CDCA3-207ENST00000538862 TMUB2Q71RG4 321 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 SLC26A10Q8NG04 563 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 IFI44Q8TCB0 444 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 ST8SIA1Q92185 356 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 RBPMSQ93062 196 aaKnown RBP13□□□□□ -0.33
CDCA3-207ENST00000538862 OR11A1Q9GZK7 315 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 KCNK15Q9H427 330 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 EXO5Q9H790 373 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 MYOZ1Q9NP98 299 aaPredicted RBP13□□□□□ -0.33
CDCA3-207ENST00000538862 MED11Q9P086 117 aa13□□□□□ -0.33
CDCA3-207ENST00000538862 UNC13CQ8NB66 2214 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 KIF26BQ2KJY2 2108 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 LAMA5O15230 3695 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 APC2O95996 2303 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 LOC390937A0A1W2PQ73 354 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 GOSR2O14653 212 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 ADAM10O14672 748 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 NUDT21O43809 227 aaKnown RBP12.99□□□□□ -0.33
CDCA3-207ENST00000538862 RP2O75695 350 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 RAB3DO95716 219 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 FOLR1P15328 257 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 MELKQ14680 651 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 C2orf68Q2NKX9 166 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 C1orf100Q5SVJ3 147 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 ADGRE4PQ86SQ3 457 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 GPAT4Q86UL3 456 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 LILRB2Q8N423 598 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 SCARB1Q8WTV0 552 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 TNFAIP8L1Q8WVP5 186 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 ASB10Q8WXI3 467 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 FOXRED1Q96CU9 486 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-207ENST00000538862 DPYSL5Q9BPU6 564 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 G6PC2Q9NQR9 355 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 RDH8Q9NYR8 311 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 ZNF224Q9NZL3 707 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 MRPS18BQ9Y676 258 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms