RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SSX8Q7RTT4 187 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 FAM169BQ8N8A8 192 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 SLC30A7Q8NEW0 376 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 CRIM1Q9NZV1 1036 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 COX5BP10606 129 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 CRYGSP22914 178 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 CDONQ4KMG0 1287 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 ZNF684Q5T5D7 378 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 PRSS48Q7RTY5 328 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 DMRTC2Q8IXT2 367 aaPredicted RBP20.39■□□□□ 0.86
TMEM260-202ENST00000538838 ZNF679Q8IYX0 411 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 POM121L2Q96KW2 1035 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 NR1H4Q96RI1 486 aaPredicted RBP20.39■□□□□ 0.86
TMEM260-202ENST00000538838 MROQ9BYG7 248 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 ELOVL3Q9HB03 270 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 ATPIF1Q9UII2 106 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 GNG8Q9UK08 70 aa20.39■□□□□ 0.86
TMEM260-202ENST00000538838 KRT8P05787 483 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 PAX7P23759 505 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 APLNRP35414 380 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 KIR2DL3P43628 341 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 ACTA2P62736 377 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 ACTG2P63267 376 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 GALK2Q01415 458 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 ECH1Q13011 328 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 RSPO1Q2MKA7 263 aaPredicted RBP20.38■□□□□ 0.85
TMEM260-202ENST00000538838 OR2G6Q5TZ20 316 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 PAQR4Q8N4S7 273 aaPredicted RBP20.38■□□□□ 0.85
TMEM260-202ENST00000538838 C4orf36Q96KX1 117 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 DACH2Q96NX9 599 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 CDCA4Q9BXL8 241 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 ISG20L2Q9H9L3 353 aaKnown RBP20.38■□□□□ 0.85
TMEM260-202ENST00000538838 ACOXLQ9NUZ1 547 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 CHCHD3Q9NX63 227 aaKnown RBP20.38■□□□□ 0.85
TMEM260-202ENST00000538838 RTTNQ86VV8 2226 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 C5orf49A4QMS7 147 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 TRIM64A6NGJ6 449 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 ABHD16AO95870 558 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 PTHP01270 115 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 CCNOP22674 350 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 HSD11B1P28845 292 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 PEX19P40855 299 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 GDI2P50395 445 aaKnown RBP20.38■□□□□ 0.85
TMEM260-202ENST00000538838 PRKXP51817 358 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 OR12D2P58182 307 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 GRB2P62993 217 aaKnown RBP20.38■□□□□ 0.85
TMEM260-202ENST00000538838 HGFACQ04756 655 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 TBC1D28Q2M2D7 210 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 C3orf36Q3SXR2 165 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 RHOUQ7L0Q8 258 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.38■□□□□ 0.85
TMEM260-202ENST00000538838 KLHL36Q8N4N3 616 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 YIPF7Q8N8F6 280 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 ZNF696Q9H7X3 374 aa20.38■□□□□ 0.85
TMEM260-202ENST00000538838 HEATR1Q9H583 2144 aaKnown RBP20.37■□□□□ 0.85
TMEM260-202ENST00000538838 METTL15A6NJ78 407 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 F5H5K5 113 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 J3QLW9 94 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 MYL12BO14950 172 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 ZNF19P17023 458 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 RIDAP52758 137 aaKnown RBP20.37■□□□□ 0.85
TMEM260-202ENST00000538838 IRF3Q14653 427 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 KRTAP27-1Q3LI81 207 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 DEGS2Q6QHC5 323 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 MEX3BQ6ZN04 569 aaKnown RBP20.37■□□□□ 0.85
TMEM260-202ENST00000538838 SPTSSAQ969W0 71 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 KCNJ15Q99712 375 aa20.37■□□□□ 0.85
TMEM260-202ENST00000538838 ZNF254O75437 659 aa20.36■□□□□ 0.85
TMEM260-202ENST00000538838 SULT1C4O75897 302 aa20.36■□□□□ 0.85
TMEM260-202ENST00000538838 OTX1P32242 354 aaPredicted RBP20.36■□□□□ 0.85
TMEM260-202ENST00000538838 MAP2K4P45985 399 aa20.36■□□□□ 0.85
TMEM260-202ENST00000538838 NAAAQ02083 359 aa20.36■□□□□ 0.85
TMEM260-202ENST00000538838 SPOCK1Q08629 439 aa20.36■□□□□ 0.85
TMEM260-202ENST00000538838 RNLSQ5VYX0 342 aa20.36■□□□□ 0.85
TMEM260-202ENST00000538838 ZNF773Q6PK81 442 aa20.36■□□□□ 0.85
TMEM260-202ENST00000538838 FAM220AQ7Z4H9 259 aa20.36■□□□□ 0.85
TMEM260-202ENST00000538838 SPRYD4Q8WW59 207 aaPredicted RBP20.36■□□□□ 0.85
TMEM260-202ENST00000538838 MRPL48Q96GC5 212 aaKnown RBP20.36■□□□□ 0.85
TMEM260-202ENST00000538838 NGBQ9NPG2 151 aa20.36■□□□□ 0.85
TMEM260-202ENST00000538838 CAB39Q9Y376 341 aaPredicted RBP20.36■□□□□ 0.85
TMEM260-202ENST00000538838 TMEM129A0AVI4 362 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 DPRXA6NFQ7 191 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 M0R135 149 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 CD40P25942 277 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 CALCRP30988 508 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 CX3CR1P49238 355 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 BSPH1Q075Z2 132 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 TMEM108Q6UXF1 575 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 SYS1Q8N2H4 156 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 ZNF283Q8N7M2 679 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 ACBD4Q8NC06 268 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 OR52N1Q8NH53 320 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 ZNF799Q96GE5 643 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 CDH20Q9HBT6 801 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 ERGIC3Q9Y282 383 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 SPTAN1Q13813 2472 aaKnown RBP20.35■□□□□ 0.85
TMEM260-202ENST00000538838 IGHV2OR16-5A0A0B4J2B6 119 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 SIAH2O43255 324 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 RPP14O95059 124 aaKnown RBP20.35■□□□□ 0.85
TMEM260-202ENST00000538838 ACSM4P0C7M7 580 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms