RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 STACQ99469 402 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SARGQ9BW04 601 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 MTCH2Q9Y6C9 303 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 C1SP09871 688 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF888P0CJ79 500 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 PI3P19957 117 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 HOXA5P20719 270 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 NFYBP25208 207 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 HOXD9P28356 352 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF84P51523 738 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 GAS1P54826 345 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 CDK5R1Q15078 307 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ISXQ2M1V0 245 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF805Q5CZA5 627 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SAPCD1Q5SSQ6 148 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 RIPPLY2Q5TAB7 128 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 HSD17B8Q92506 261 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TM4SF18Q96CE8 201 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 CMC2Q9NRP2 79 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 AK3Q9UIJ7 227 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 GPR55Q9Y2T6 319 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SBF1O95248 1867 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1B0GTI1 187 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM210A6NLX4 147 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 EIF4E2O60573 245 aaKnown RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SEMA7AO75326 666 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 GLSO94925 669 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 C8AP07357 584 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 CST5P28325 142 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 GDI1P31150 447 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 FCGR2CP31995 323 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TLE3Q04726 772 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 GAGE1Q13065 139 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SLC22A6Q4U2R8 563 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 BHLHA9Q7RTU4 235 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 LRP11Q86VZ4 500 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 CDRT4Q8N9R6 151 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 MRPL38Q96DV4 380 aaKnown RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 PRSS16Q9NQE7 514 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 PRTFDC1Q9NRG1 225 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1W2PPC1 479 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM212A6NML5 194 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 M0QZQ0 153 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 P2RY10O00398 339 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 OGG1O15527 345 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ABLIM3O94929 683 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 CHRM4P08173 479 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 CD37P11049 281 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 CCNOP22674 350 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 MAS1LP35410 378 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 HTR5AP47898 357 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ARRB1P49407 418 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ATP1B3P54709 279 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ABLIM2Q6H8Q1 611 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ETFBKMTQ8IXQ9 262 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 C10orf111Q8N326 155 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 OR5K2Q8NHB8 316 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 PTX4Q96A99 478 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SPIN2AQ99865 258 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SPIN2BQ9BPZ2 258 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 FAM117AQ9C073 453 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SFXN1Q9H9B4 322 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SERINC1Q9NRX5 453 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 LHX3Q9UBR4 397 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 KCNE5Q9UJ90 142 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF337Q9Y3M9 751 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 A8MXE2 369 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 LRP3O75074 770 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 LDB3O75112 727 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 THBS1P07996 1170 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ECI1P42126 302 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TESK1Q15569 626 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 AWAT1Q58HT5 328 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 LYG2Q86SG7 212 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ADPRHL1Q8NDY3 354 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 HIST1H2BAQ96A08 127 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 NMES1Q9C002 83 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TM7SF3Q9NS93 570 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 PATJQ8NI35 1801 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 MED19A0JLT2 244 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 A6NLC8 198 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 B4DGG1 531 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 LILRB3O75022 631 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 GCM2O75603 506 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SNAI1O95863 264 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TIMP1P01033 207 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 CD14P08571 375 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 RPL12P30050 165 aaKnown RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 PLCXD2Q0VAA5 305 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 MARCH8Q5T0T0 291 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TPGS2Q68CL5 300 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM229BQ8NBD8 167 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SUMF1Q8NBK3 374 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 NDUFAF3Q9BU61 184 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SLC2A8Q9NY64 477 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TAAR2Q9P1P5 351 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 FLVCR1Q9Y5Y0 555 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 EVPLQ92817 2033 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TGM5O43548 720 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms