RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 HIF1ANQ9NWT6 349 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 ASH2LQ9UBL3 628 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 FZR1Q9UM11 496 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 BAIAP2Q9UQB8 552 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 A0A1W2PPW3 197 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 WNT9BO14905 357 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 NCR1O76036 304 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 MPZL1O95297 269 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 RENP00797 406 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 TFP02787 698 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 NAT2P11245 290 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 CRYBB2P43320 205 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 RGS6P49758 472 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 ARHGDIAP52565 204 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 PPP1CBP62140 327 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 GLO1Q04760 184 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 SLC34A1Q06495 639 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 NKPD1Q17RQ9 610 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 LEG1Q6P5S2 330 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 COLCA1Q6ZS62 124 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 RFPL4BQ6ZWI9 263 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 PAPD5Q8NDF8 572 aaKnown RBP10.58□□□□□ -0.72
PRKDC-207ENST00000536483 SEMA6DQ8NFY4 1073 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 OR9Q2Q8NGE9 314 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 OR4K13Q8NH42 304 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 OR1F12Q8NHA8 337 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 SLC25A40Q8TBP6 338 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 TMEM186Q96B77 213 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 CLPTM1LQ96KA5 538 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 TSSK2Q96PF2 358 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 DIRC2Q96SL1 478 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 COQ7Q99807 217 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 CHID1Q9BWS9 393 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 OR2J1Q9GZK6 312 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 REEP1Q9H902 201 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 VNN3Q9NY84 501 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 TREM2Q9NZC2 230 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 CYB5R1Q9UHQ9 305 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 KCNG2Q9UJ96 466 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 SAMHD1Q9Y3Z3 626 aaKnown RBP10.58□□□□□ -0.72
PRKDC-207ENST00000536483 LRRC42Q9Y546 428 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 LHFPL6Q9Y693 200 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 TENM1Q9UKZ4 2725 aa10.58□□□□□ -0.72
PRKDC-207ENST00000536483 A0A0A6YYJ9 748 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 TCRBV3S1A0A5B6 114 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 RER1O15258 196 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 DOK2O60496 412 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 RGS9O75916 674 aaPredicted RBP10.57□□□□□ -0.72
PRKDC-207ENST00000536483 MT-ND5P03915 603 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 MSMBP08118 114 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 CD55P08174 381 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 KITLGP21583 273 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 CCNOP22674 350 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 GCH1P30793 250 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 GGT2P36268 569 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 MPV17P39210 176 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 HTR5AP47898 357 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 PSG7Q13046 419 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 KPNB1Q14974 876 aaKnown RBP10.57□□□□□ -0.72
PRKDC-207ENST00000536483 PCK2Q16822 640 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 RSPO1Q2MKA7 263 aaPredicted RBP10.57□□□□□ -0.72
PRKDC-207ENST00000536483 SLC36A3Q495N2 470 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 C1orf146Q5VVC0 180 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 TMEM154Q6P9G4 183 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 JAZF1Q86VZ6 243 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 OR52L1Q8NGH7 329 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 OR8D4Q8NGM9 314 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 ABHD4Q8TB40 342 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 SNX33Q8WV41 574 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 CANT1Q8WVQ1 401 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 YIPF5Q969M3 257 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 HAVCR1Q96D42 359 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 LRGUKQ96M69 825 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 RBM4Q9BWF3 364 aaKnown RBP10.57□□□□□ -0.72
PRKDC-207ENST00000536483 NMNAT2Q9BZQ4 307 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 HDHD2Q9H0R4 259 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 EGLN3Q9H6Z9 239 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 SRA1Q9HD15 236 aaKnown RBP10.57□□□□□ -0.72
PRKDC-207ENST00000536483 ZNF275Q9NSD4 429 aaPredicted RBP10.57□□□□□ -0.72
PRKDC-207ENST00000536483 PLEK2Q9NYT0 353 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 ZDHHC8Q9ULC8 765 aa10.57□□□□□ -0.72
PRKDC-207ENST00000536483 A0A1B0GWJ7 208 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 DHRS12A0PJE2 317 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 PPIHO43447 177 aaKnown RBP10.56□□□□□ -0.72
PRKDC-207ENST00000536483 ABHD16AO95870 558 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 RAC2P15153 192 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 NOS3P29474 1203 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 VHLP40337 213 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 MAGEB1P43366 347 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 ZNF81P51508 661 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 SLC25A1P53007 311 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 TEKQ02763 1124 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.56□□□□□ -0.72
PRKDC-207ENST00000536483 ECH1Q13011 328 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 CDK5R2Q13319 367 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 ALKBH6Q3KRA9 238 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 TEX30Q5JUR7 227 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 SLC18B1Q6NT16 456 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 ZFP1Q6P2D0 407 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 SHQ1Q6PI26 577 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms