RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CEACAM8P31997 349 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 RPL4P36578 427 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 TGFBR1P36897 503 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 NNMTP40261 264 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PSMB10P40306 273 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 NPBWR1P48145 328 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 MRPL19P49406 292 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 KHKP50053 298 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TNFSF10P50591 281 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 NOVA1P51513 510 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 SMSP52788 366 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 EFNA3P52797 238 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CLDN18P56856 261 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 RGS8P57771 180 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR10A3P58181 314 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 UBE2G2P60604 165 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 MAXP61244 160 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ERVS71-1P61550 626 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 MYL7Q01449 175 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 MC1RQ01726 317 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OGDHQ02218 1023 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 IRF8Q02556 426 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TCP10Q12799 353 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 UBE2V1Q13404 147 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SNTB2Q13425 540 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 CDH18Q13634 790 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TPBGQ13641 420 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ENPP2Q13822 863 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 IL18Q14116 193 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 KIAA0141Q14154 515 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 TMEM187Q14656 261 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SLC17A1Q14916 467 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ABRAXAS2Q15018 415 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 RAB35Q15286 201 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SHHQ15465 462 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ADIPOQQ15848 244 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 DECR1Q16698 335 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TMEM241Q24JQ0 296 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 C5orf64Q2M2E5 130 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 BEX5Q5H9J7 111 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 FBXO47Q5MNV8 452 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 COL5A1-AS1Q5SY13 56 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 GCNT6Q5T4J0 391 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 IDNKQ5T6J7 187 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 BCL2L15Q5TBC7 163 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 KHDRBS2Q5VWX1 349 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 SLC22A10Q63ZE4 541 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 NCR3LG1Q68D85 454 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 C18orf63Q68DL7 685 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ZNF57Q68EA5 555 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 ZNF660Q6AZW8 331 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 ZNF774Q6NX45 483 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SLC22A25Q6T423 547 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TMEM270Q6UE05 265 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 FAM151BQ6UXP7 276 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ZNF836Q6ZNA1 936 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ASB18Q6ZVZ8 466 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 DPPA4Q7L190 304 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TCF24Q7RTU0 167 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 FAM220AQ7Z4H9 259 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 LINC01551Q86U37 167 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 VASH2Q86V25 355 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PARGQ86W56 976 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 VRK2Q86Y07 508 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PTOV1Q86YD1 416 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CNTN4Q8IWV2 1026 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 C1orf87Q8N0U7 546 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ZNF444Q8N0Y2 327 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 ZNF664Q8N3J9 261 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 MYCT1Q8N699 235 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 STPG4Q8N801 248 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SAMD12Q8N8I0 201 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PI4KAP1Q8N8J0 262 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 GPR26Q8NDV2 337 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TMEM185AQ8NFB2 350 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 RDM1Q8NG50 284 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR2AP1Q8NGE2 309 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR9Q2Q8NGE9 314 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR5B17Q8NGF7 314 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR10D4PQ8NGN7 298 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR9Q1Q8NGQ5 310 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR9A4Q8NGU2 314 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR56B4Q8NH76 319 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CNIH3Q8TBE1 160 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PIGXQ8TBF5 258 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CSGALNACT1Q8TDX6 532 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 DUSP19Q8WTR2 217 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 C11orf40Q8WZ69 217 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 RGP1Q92546 391 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 GGHQ92820 318 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 GHSRQ92847 366 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ARL11Q969Q4 196 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PSMG2Q969U7 264 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 LRRC58Q96CX6 371 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 BPIFA2Q96DR5 249 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CPNE2Q96FN4 548 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 AMDHD1Q96NU7 426 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TGM7Q96PF1 710 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PCYT2Q99447 389 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 LPAR4Q99677 370 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms