RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 COQ7Q99807 217 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 ABHD6Q9BV23 337 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 VCX3BQ9H321 246 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 OR51B6Q9H340 312 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 ZNF442Q9H7R0 627 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 VCX3AQ9NNX9 186 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 AASSQ9UDR5 926 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 ATPIF1Q9UII2 106 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 KLHDC2Q9Y2U9 406 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 DPPA5A6NC42 116 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 SLC22A31A6NKX4 558 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 ICMTO60725 284 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 SMPD2O60906 423 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 ENTPD6O75354 484 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 OR4A8P0C604 315 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 GABRB1P18505 474 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 HTR1FP30939 366 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 GLRXP35754 106 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 SERPINF1P36955 418 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 HCCSP53701 268 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 ADARB1P78563 741 aaKnown RBP10.39□□□□□ -0.75
CHD4-203ENST00000535717 ECH1Q13011 328 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 EIF2B1Q14232 305 aaKnown RBP10.39□□□□□ -0.75
CHD4-203ENST00000535717 OCLNQ16625 522 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 SLC16A9Q7RTY1 509 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 DTX2Q86UW9 622 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 FBXL14Q8N1E6 418 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 DHRSXQ8N5I4 330 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 RHOXF1Q8NHV9 184 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 OTOSQ8NHW6 89 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 SLAMF6Q96DU3 332 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 C4orf45Q96LM5 186 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 AMELYQ99218 206 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 CNN2Q99439 309 aaKnown RBP10.39□□□□□ -0.75
CHD4-203ENST00000535717 CCL19Q99731 98 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 ATF6BQ99941 703 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 DDX28Q9NUL7 540 aaKnown RBP10.39□□□□□ -0.75
CHD4-203ENST00000535717 FAIMQ9NVQ4 179 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 HAO2Q9NYQ3 351 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 EIF3KQ9UBQ5 218 aaKnown RBP10.39□□□□□ -0.75
CHD4-203ENST00000535717 WARS2Q9UGM6 360 aaKnown RBP10.39□□□□□ -0.75
CHD4-203ENST00000535717 LAMP3Q9UQV4 416 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 GRIP1Q9Y3R0 1128 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 AKAP9Q99996 3911 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 OTOGQ6ZRI0 2925 aa10.39□□□□□ -0.75
CHD4-203ENST00000535717 F5H5K5 113 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 CLIC3O95833 236 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 ABHD16AO95870 558 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 NGFP01138 241 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 LCKP06239 509 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 ACSM4P0C7M7 580 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 ALOX5APP20292 161 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 DNASE1P24855 282 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 RAD52P43351 418 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 ERVS71-1P61550 626 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 MST1LQ2TV78 715 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 ZNF691Q5VV52 312 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 AGAP6Q5VW22 663 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 TTC23Q5W5X9 447 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 ARL9Q6T311 187 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 RFPL4BQ6ZWI9 263 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 SPATC1Q76KD6 591 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 MUC15Q8N387 334 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 ZNF454Q8N9F8 522 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 ABHD4Q8TB40 342 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 THEM6Q8WUY1 208 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 RNF133Q8WVZ7 376 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 RFKQ969G6 155 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 NR1H4Q96RI1 486 aaPredicted RBP10.38□□□□□ -0.75
CHD4-203ENST00000535717 DCLRE1CQ96SD1 692 aaKnown RBP10.38□□□□□ -0.75
CHD4-203ENST00000535717 APOL4Q9BPW4 351 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
CHD4-203ENST00000535717 ADI1Q9BV57 179 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 BCL2L14Q9BZR8 327 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 ADGRL4Q9HBW9 690 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 CENPMQ9NSP4 180 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 CBLN4Q9NTU7 201 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 FZR1Q9UM11 496 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 EDARQ9UNE0 448 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 CMAHPQ9Y471 501 aa10.38□□□□□ -0.75
CHD4-203ENST00000535717 TMEM129A0AVI4 362 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 ZNF878C9JN71 531 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 MPZL2O60487 215 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 LYNP07948 512 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 GNAO1P09471 354 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 SBK2P0C263 348 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 OTX1P32242 354 aaPredicted RBP10.37□□□□□ -0.75
CHD4-203ENST00000535717 CAPGP40121 348 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 VHLP40337 213 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 NUDT6P53370 316 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 AQP4P55087 323 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 PPP1CBP62140 327 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 RPS23P62266 143 aaKnown RBP10.37□□□□□ -0.75
CHD4-203ENST00000535717 TMED1Q13445 227 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 EFNB3Q15768 340 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 SWI5Q1ZZU3 235 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 SPATA46Q5T0L3 261 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 MEDAGQ5VYS4 303 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 C11orf71Q6IPW1 123 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 RGS7BPQ6MZT1 257 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms