RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 OR8B2Q96RD0 313 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 PITX2Q99697 317 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 SSBP3Q9BWW4 388 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 SPAG4Q9NPE6 437 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 TMEM100Q9NV29 134 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 CMTM6Q9NX76 183 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 PTTG3PQ9NZH4 202 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 ADA2Q9NZK5 511 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 KLHL21Q9UJP4 597 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 COA3Q9Y2R0 106 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 IER3IP1Q9Y5U9 82 aa11.19□□□□□ -0.62
CLSTN3-205ENST00000535452 A0A1W2PRQ8 180 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 CRYBA1P05813 215 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 H2AFXP16104 143 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 CTLA4P16410 223 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 ZNF823P16415 610 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 GSK3BP49841 420 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 UBA52P62987 128 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 MZT1Q08AG7 82 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 DGCR6Q14129 220 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 AWAT1Q58HT5 328 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 MESTQ5EB52 335 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 TBPL2Q6SJ96 375 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 SMARCD3Q6STE5 483 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 HACD2Q6Y1H2 254 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 OR8G5Q8NG78 346 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 OR52L1Q8NGH7 329 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 FANK1Q8TC84 345 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 ZDHHC16Q969W1 377 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 ERMAPQ96PL5 475 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 COQ7Q99807 217 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 SLC22A4Q9H015 551 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 STARD10Q9Y365 291 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 SNX13Q9Y5W8 968 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 CUBNO60494 3623 aa11.18□□□□□ -0.62
CLSTN3-205ENST00000535452 OR10H3O60404 316 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 AVPP01185 164 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 SLC6A9P48067 706 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 TPTEP56180 551 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 SPIBQ01892 262 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 GLYATQ6IB77 296 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 OR2T2Q6IF00 324 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 LEG1Q6P5S2 330 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 MRPL21Q7Z2W9 205 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 SIGLECL1Q8N7X8 197 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 OR52J3Q8NH60 311 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 SPTSSAQ969W0 71 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 ERGIC1Q969X5 290 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 NEIL1Q96FI4 390 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 GPX7Q96SL4 187 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 IFT27Q9BW83 186 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 NUAK2Q9H093 628 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 MED4Q9NPJ6 270 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 NRIP3Q9NQ35 241 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 TRIM36Q9NQ86 728 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 VSX1Q9NZR4 365 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 CLN8Q9UBY8 286 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 INSIG2Q9Y5U4 225 aa11.17□□□□□ -0.62
CLSTN3-205ENST00000535452 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 F5H5K5 113 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 TMEM178BH3BS89 294 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 NME4O00746 187 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 CDC42EP2O14613 210 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 IMPA2O14732 288 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 RER1O15258 196 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 GADD45GO95257 159 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 LCATP04180 440 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 ZNF12P17014 697 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 PRTN3P24158 256 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 FPR3P25089 353 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 MMP16P51512 607 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 PSME3P61289 254 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 IL13RA1P78552 427 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 TAF13Q15543 124 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 RPL13AP3Q6NVV1 102 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 FBXW12Q6X9E4 464 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 C1orf229Q6ZS94 237 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 PGAP1Q75T13 922 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 BHLHE23Q8NDY6 225 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 OR10AD1Q8NGE0 317 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 SLC7A13Q8TCU3 470 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 MEGF10Q96KG7 1140 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 MMADHCQ9H3L0 296 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 SRA1Q9HD15 236 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 GCM1Q9NP62 436 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 NDE1Q9NXR1 346 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 MAGEL2Q9UJ55 1249 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 SIGLEC7Q9Y286 467 aa11.16□□□□□ -0.62
CLSTN3-205ENST00000535452 CEACAM18A8MTB9 384 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 A8MXK9 166 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 FFAR1O14842 300 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 PPP1R3DO95685 299 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 HKR1P10072 659 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 NCK1P16333 377 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 GGT2P36268 569 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 MXRA7P84157 204 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 HLXQ14774 488 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 ZMYND11Q15326 602 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 GPR157Q5UAW9 335 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 CD276Q5ZPR3 534 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms