RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 NIPSNAP1Q9BPW8 284 aa11.77□□□□□ -0.53
TMEM258-203ENST00000535297 RBM4Q9BWF3 364 aaKnown RBP11.77□□□□□ -0.53
TMEM258-203ENST00000535297 MRPL22Q9NWU5 206 aaKnown RBP11.77□□□□□ -0.53
TMEM258-203ENST00000535297 DNAJB9Q9UBS3 223 aa11.77□□□□□ -0.53
TMEM258-203ENST00000535297 CYB5R1Q9UHQ9 305 aa11.77□□□□□ -0.53
TMEM258-203ENST00000535297 ABCA2Q9BZC7 2435 aa11.77□□□□□ -0.53
TMEM258-203ENST00000535297 ZSCAN5BA6NJL1 495 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 RIIAD1A6NNX1 92 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 TIMM8AO60220 97 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-203ENST00000535297 LILRA1O75019 489 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 E2F6O75461 281 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 RP2O75695 350 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 DBHP09172 617 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 ZNF823P16415 610 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 ZNF3P17036 446 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 KITLGP21583 273 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 COL8A2P25067 703 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 PYCR1P32322 319 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 GRK5P34947 590 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 GGT2P36268 569 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 GPR6P46095 362 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-203ENST00000535297 SLC25A1P53007 311 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 TMEM33P57088 247 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 CCL8P80075 99 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 DBPQ10586 325 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-203ENST00000535297 ECH1Q13011 328 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 CRMP1Q14194 572 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 KRTAP27-1Q3LI81 207 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 CFAP77Q6ZQR2 320 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 TMEM179BQ7Z7N9 219 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 LINC00346Q8IVM7 164 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 HPS1Q92902 700 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 APOBEC3DQ96AK3 386 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-203ENST00000535297 DIRC2Q96SL1 478 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 CDADC1Q9BWV3 514 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 NMNAT2Q9BZQ4 307 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 POFUT1Q9H488 388 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 ZNF275Q9NSD4 429 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-203ENST00000535297 DECR2Q9NUI1 292 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 TMEM160Q9NX00 188 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 PDP1Q9P0J1 537 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-203ENST00000535297 ZDHHC8Q9ULC8 765 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 MALRD1Q5VYJ5 2156 aa11.76□□□□□ -0.53
TMEM258-203ENST00000535297 ANK3Q12955 4377 aaKnown RBP11.75□□□□□ -0.53
TMEM258-203ENST00000535297 IGHV1-69-2A0A0G2JMI3 117 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 H3BN98 237 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 TPD52L2O43399 206 aaKnown RBP11.75□□□□□ -0.53
TMEM258-203ENST00000535297 IGHV1-46P01743 117 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 CRYBB2P43320 205 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 BLVRAP53004 296 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 PSG7Q13046 419 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 TRIP10Q15642 601 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 TSTQ16762 297 aaKnown RBP11.75□□□□□ -0.53
TMEM258-203ENST00000535297 OR5L1Q8NGL2 311 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 OR9Q1Q8NGQ5 310 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 MSI2Q96DH6 328 aaKnown RBP11.75□□□□□ -0.53
TMEM258-203ENST00000535297 ELMOD3Q96FG2 381 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 PITX2Q99697 317 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 ATF6BQ99941 703 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 EGLN1Q9GZT9 426 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 MMADHCQ9H3L0 296 aaPredicted RBP11.75□□□□□ -0.53
TMEM258-203ENST00000535297 ZNF556Q9HAH1 456 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 PNRC2Q9NPJ4 139 aaKnown RBP11.75□□□□□ -0.53
TMEM258-203ENST00000535297 CMC2Q9NRP2 79 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 PURGQ9UJV8 347 aaKnown RBP11.75□□□□□ -0.53
TMEM258-203ENST00000535297 STARD10Q9Y365 291 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 COMMD3-BMI1R4GMX3 469 aa11.75□□□□□ -0.53
TMEM258-203ENST00000535297 TANC2Q9HCD6 1990 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 LRP5LA4QPB2 252 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 SPRY3O43610 288 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 DEAF1O75398 565 aaPredicted RBP11.74□□□□□ -0.53
TMEM258-203ENST00000535297 CD55P08174 381 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 ANXA8P13928 327 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 RAC2P15153 192 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 SPI1P17947 270 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 CDK5R2Q13319 367 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 FAM166AQ6J272 317 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 SLC27A4Q6P1M0 643 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 FBXW12Q6X9E4 464 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 COLCA1Q6ZS62 124 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 USP51Q70EK9 711 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 HIPK1Q86Z02 1210 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 DNAJC9Q8WXX5 260 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 PTP4A1Q93096 173 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 SLCO4A1Q96BD0 722 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 HAVCR1Q96D42 359 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 CMBLQ96DG6 245 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 NRBF2Q96F24 287 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 KCNS2Q9ULS6 477 aa11.74□□□□□ -0.53
TMEM258-203ENST00000535297 LOC100289279A0A1B0GTE1 492 aa11.73□□□□□ -0.53
TMEM258-203ENST00000535297 TVP23AA6NH52 213 aa11.73□□□□□ -0.53
TMEM258-203ENST00000535297 PPIHO43447 177 aaKnown RBP11.73□□□□□ -0.53
TMEM258-203ENST00000535297 LMX1BO60663 402 aa11.73□□□□□ -0.53
TMEM258-203ENST00000535297 CDC14BO60729 498 aa11.73□□□□□ -0.53
TMEM258-203ENST00000535297 ACSM4P0C7M7 580 aa11.73□□□□□ -0.53
TMEM258-203ENST00000535297 OSMP13725 252 aa11.73□□□□□ -0.53
TMEM258-203ENST00000535297 FMO3P31513 532 aa11.73□□□□□ -0.53
TMEM258-203ENST00000535297 ENTPD1P49961 510 aa11.73□□□□□ -0.53
TMEM258-203ENST00000535297 ERFP50548 548 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms