RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 KLRB1Q12918 225 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 C1orf61Q13536 156 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 TSC22D1Q15714 1073 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 DGUOKQ16854 277 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 SLC25A35Q3KQZ1 300 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 BLOC1S2Q6QNY1 142 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 TICAM2Q86XR7 235 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 CCDC170Q8IYT3 715 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 CSGALNACT2Q8N6G5 542 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 OR1J4Q8NGS1 313 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 OR10T2Q8NGX3 314 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 OR10R2Q8NGX6 335 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 SH3GL1Q99961 368 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 NAA38Q9BRA0 125 aaKnown RBP-0.22□□□□□ -2.44
COPB1-212ENST00000534771 DESI2Q9BSY9 194 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 CXCL16Q9H2A7 254 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 LRRC19Q9H756 370 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 KIR3DX1Q9H7L2 352 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 MEAF6Q9HAF1 191 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 KCNJ16Q9NPI9 418 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 INIPQ9NRY2 104 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 TAS2R5Q9NYW4 299 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 VANGL2Q9ULK5 521 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 AURKCQ9UQB9 309 aa-0.22□□□□□ -2.44
COPB1-212ENST00000534771 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.22□□□□□ -2.44
COPB1-212ENST00000534771 MED13Q9UHV7 2174 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 LAMB4A4D0S4 1761 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 A0A1B0GVL5 298 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 CLRN2A0PK11 232 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 MBLAC1A4D2B0 266 aaPredicted RBP-0.23□□□□□ -2.45
COPB1-212ENST00000534771 F6UB75 175 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 H3BRN7 92 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 L7N2F9 121 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 TNFRSF11BO00300 401 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 ZNF189O75820 626 aaPredicted RBP-0.23□□□□□ -2.45
COPB1-212ENST00000534771 NEBLO76041 1014 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 DIRAS1O95057 198 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 KCNK2O95069 426 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 IGHV1-46P01743 117 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 C2P06681 752 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 HSMCR30P0CW71 290 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 NELFEP18615 380 aaKnown RBP-0.23□□□□□ -2.45
COPB1-212ENST00000534771 FUT1P19526 365 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 CCR1P32246 355 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 MPIP34949 423 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 TPMTP51580 245 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 SYNJ2BPP57105 145 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 MXD1Q05195 221 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 TGM3Q08188 693 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 ECH1Q13011 328 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 DGCR6Q14129 220 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 GAMTQ14353 236 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 QPRTQ15274 297 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 RALBP1Q15311 655 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 DEFB115Q30KQ5 88 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 C2orf76Q3KRA6 126 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 LGALSLQ3ZCW2 172 aaPredicted RBP-0.23□□□□□ -2.45
COPB1-212ENST00000534771 FILIP1LQ4L180 1135 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 ZNF767PQ75MW2 155 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 CCDC91Q7Z6B0 441 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 GID4Q8IVV7 300 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 NKAIN4Q8IVV8 208 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 C2orf73Q8N5S3 287 aaPredicted RBP-0.23□□□□□ -2.45
COPB1-212ENST00000534771 ZNF645Q8N7E2 425 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 COX18Q8N8Q8 333 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 ZFP41Q8N8Y5 198 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 C19orf18Q8NEA5 215 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 OR8K1Q8NGG5 319 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 OR4D5Q8NGN0 318 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 OR52N1Q8NH53 320 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 OR10G6Q8NH81 332 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 ZNF420Q8TAQ5 688 aaPredicted RBP-0.23□□□□□ -2.45
COPB1-212ENST00000534771 DCANP1Q8TF63 244 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 YIPF5Q969M3 257 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 C14orf79Q96F83 325 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 SERPINB12Q96P63 405 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 OMDQ99983 421 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 C2orf40Q9H1Z8 148 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 DYRK4Q9NR20 520 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 MRPL16Q9NX20 251 aaKnown RBP-0.23□□□□□ -2.45
COPB1-212ENST00000534771 SUN2Q9UH99 717 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 PCSK1NQ9UHG2 260 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 SLC7A8Q9UHI5 535 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 SH3BGRL2Q9UJC5 107 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 ST3GAL6Q9Y274 331 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 SLC22A7Q9Y694 548 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 MEGF8Q7Z7M0 2845 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 BAZ2AQ9UIF9 1905 aaKnown RBP-0.23□□□□□ -2.45
COPB1-212ENST00000534771 CRB1P82279 1406 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 ATP10AO60312 1499 aa-0.23□□□□□ -2.45
COPB1-212ENST00000534771 TSPOAP1O95153 1857 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 IGLV1-36A0A0B4J1U3 117 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 IGKV1-8A0A0C4DH67 115 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 ERICH4A6NGS2 130 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 DYNC1I1O14576 645 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 PRKAB2O43741 272 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 DPM1O60762 260 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 BCAS2O75934 225 aaPredicted RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 TM7SF2O76062 418 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 OR7A10O76100 309 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms