RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 JAZF1Q86VZ6 243 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 CCDC197Q8NCU1 140 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 HAVCR1Q96D42 359 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 DCLRE1CQ96SD1 692 aaKnown RBP11.91□□□□□ -0.5
SF3B2-215ENST00000534307 DIRC2Q96SL1 478 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 COQ7Q99807 217 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 PLA2G12AQ9BZM1 189 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 HDHD2Q9H0R4 259 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 MAGIXQ9H6Y5 334 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 EGLN3Q9H6Z9 239 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 ZNF665Q9H7R5 613 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 SRA1Q9HD15 236 aaKnown RBP11.91□□□□□ -0.5
SF3B2-215ENST00000534307 VNN3Q9NY84 501 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 IL20Q9NYY1 176 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 PURGQ9UJV8 347 aaKnown RBP11.91□□□□□ -0.5
SF3B2-215ENST00000534307 GRIP1Q9Y3R0 1128 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 WIPI2Q9Y4P8 454 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 CDH10Q9Y6N8 788 aa11.91□□□□□ -0.5
SF3B2-215ENST00000534307 TNFRSF11BO00300 401 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 TPD52L2O43399 206 aaKnown RBP11.9□□□□□ -0.5
SF3B2-215ENST00000534307 TIMM8AO60220 97 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-215ENST00000534307 RENP00797 406 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 CALB2P22676 271 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 GGT2P36268 569 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 RGS6P49758 472 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 ERFP50548 548 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 SRSF2Q01130 221 aaKnown RBP11.9□□□□□ -0.5
SF3B2-215ENST00000534307 MVKQ03426 396 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 SLC18B1Q6NT16 456 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 CORO6Q6QEF8 472 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 FBXW12Q6X9E4 464 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 CFAP77Q6ZQR2 320 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 COLCA1Q6ZS62 124 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 GLCCI1Q86VQ1 547 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 LINC00471Q8N535 108 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 SDR9C7Q8NEX9 313 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 GJC3Q8NFK1 279 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 OR8D4Q8NGM9 314 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 TMEM186Q96B77 213 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 COG8Q96MW5 612 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 EGLN1Q9GZT9 426 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 FN3KQ9H479 309 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 PNRC2Q9NPJ4 139 aaKnown RBP11.9□□□□□ -0.5
SF3B2-215ENST00000534307 RPRD1BQ9NQG5 326 aaKnown RBP11.9□□□□□ -0.5
SF3B2-215ENST00000534307 HIF1ANQ9NWT6 349 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 CYB5R1Q9UHQ9 305 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 POLR1DQ9Y2S0 133 aa11.9□□□□□ -0.5
SF3B2-215ENST00000534307 GASTP01350 101 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 IGHV2-5P01817 119 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 RAC2P15153 192 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 PCMT1P22061 227 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 NOS3P29474 1203 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.89□□□□□ -0.51
SF3B2-215ENST00000534307 HNRNPA0Q13151 305 aaKnown RBP11.89□□□□□ -0.51
SF3B2-215ENST00000534307 CLEC12AQ5QGZ9 265 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 SLC35F1Q5T1Q4 408 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 RPL13AP3Q6NVV1 102 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 RASSF6Q6ZTQ3 369 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 DHFR2Q86XF0 187 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 OR52E2Q8NGJ4 325 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 OR51F2Q8NH61 342 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 CCL17Q92583 94 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 PTP4A1Q93096 173 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 CMBLQ96DG6 245 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 ASB9Q96DX5 294 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 C1orf21Q9H246 121 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 LPAR2Q9HBW0 351 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 G6PC2Q9NQR9 355 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 MRPL22Q9NWU5 206 aaKnown RBP11.89□□□□□ -0.51
SF3B2-215ENST00000534307 DCAF16Q9NXF7 216 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 TAS2R1Q9NYW7 299 aa11.89□□□□□ -0.51
SF3B2-215ENST00000534307 PRPF19Q9UMS4 504 aaKnown RBP11.89□□□□□ -0.51
SF3B2-215ENST00000534307 TRAV20A0A0B4J274 112 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 ACOT8O14734 319 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 CCNB2O95067 398 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 CENPAP49450 140 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 TNFAIP6P98066 277 aaPredicted RBP11.88□□□□□ -0.51
SF3B2-215ENST00000534307 PPP1R8Q12972 351 aaKnown RBP11.88□□□□□ -0.51
SF3B2-215ENST00000534307 HLXQ14774 488 aaPredicted RBP11.88□□□□□ -0.51
SF3B2-215ENST00000534307 OR2T5Q6IEZ7 315 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.88□□□□□ -0.51
SF3B2-215ENST00000534307 LNX2Q8N448 690 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 AQP11Q8NBQ7 271 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 OR52L1Q8NGH7 329 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 OR2T29Q8NH02 315 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 ZNRF4Q8WWF5 429 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 RAB1CQ92928 201 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 APOBEC3DQ96AK3 386 aaPredicted RBP11.88□□□□□ -0.51
SF3B2-215ENST00000534307 TIMD4Q96H15 378 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 C1QTNF5Q9BXJ0 243 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 DGCR6LQ9BY27 220 aa11.88□□□□□ -0.51
SF3B2-215ENST00000534307 A0A1B0GWJ7 208 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 ACSM4P0C7M7 580 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 PSKH1P11801 424 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 RBMXP38159 391 aaKnown RBP11.87□□□□□ -0.51
SF3B2-215ENST00000534307 SLC3A1Q07837 685 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 MICAQ29983 383 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 SLC36A3Q495N2 470 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 ACSM5Q6NUN0 579 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 C1orf229Q6ZS94 237 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms