RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 LINC00346Q8IVM7 164 aa13.55□□□□□ -0.24
TSKU-204ENST00000533752 ZCCHC24Q8N2G6 241 aaKnown RBP13.55□□□□□ -0.24
TSKU-204ENST00000533752 ZNF786Q8N393 782 aa13.55□□□□□ -0.24
TSKU-204ENST00000533752 OR5L1Q8NGL2 311 aa13.55□□□□□ -0.24
TSKU-204ENST00000533752 OR6K6Q8NGW6 343 aa13.55□□□□□ -0.24
TSKU-204ENST00000533752 ATF6BQ99941 703 aa13.55□□□□□ -0.24
TSKU-204ENST00000533752 SMR3AQ99954 134 aa13.55□□□□□ -0.24
TSKU-204ENST00000533752 PRRG3Q9BZD7 231 aa13.55□□□□□ -0.24
TSKU-204ENST00000533752 NKIRAS2Q9NYR9 191 aa13.55□□□□□ -0.24
TSKU-204ENST00000533752 COMMD3-BMI1R4GMX3 469 aa13.55□□□□□ -0.24
TSKU-204ENST00000533752 G3V2T6 193 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 NGFP01138 241 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 USF1P22415 310 aaPredicted RBP13.54□□□□□ -0.24
TSKU-204ENST00000533752 PRKACGP22612 351 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 GIFP27352 417 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 NR4A2P43354 598 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 ENTPD1P49961 510 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 GINS1Q14691 196 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 FAM209AQ5JX71 171 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 CFAP77Q6ZQR2 320 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 C10orf67Q8IYJ2 551 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 APOBEC3DQ96AK3 386 aaPredicted RBP13.54□□□□□ -0.24
TSKU-204ENST00000533752 PLEKHA8Q96JA3 519 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 GABARAPL1Q9H0R8 117 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 SLC25A19Q9HC21 320 aa13.54□□□□□ -0.24
TSKU-204ENST00000533752 A0A096LNT2 108 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 VWC2LB2RUY7 222 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 PRR23D1E9PI22 279 aaPredicted RBP13.53□□□□□ -0.24
TSKU-204ENST00000533752 SURF4O15260 269 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 GYPBP06028 91 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 PRR23D2P0DMB1 279 aaPredicted RBP13.53□□□□□ -0.24
TSKU-204ENST00000533752 ZNF23P17027 643 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 MPV17P39210 176 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 ZNF81P51508 661 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 ACTR3P61158 418 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 ESRRGP62508 458 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 CDK5Q00535 292 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 ALKBH6Q3KRA9 238 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 TEX30Q5JUR7 227 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 ZFP1Q6P2D0 407 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 MAPK1IP1LQ8NDC0 245 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 OR51L1Q8NGJ5 315 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 SLC7A6Q92536 515 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 RDH5Q92781 318 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 SPTSSAQ969W0 71 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 DIRC2Q96SL1 478 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 CHODLQ9H9P2 273 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 KRT84Q9NSB2 600 aa13.53□□□□□ -0.24
TSKU-204ENST00000533752 DDX28Q9NUL7 540 aaKnown RBP13.53□□□□□ -0.24
TSKU-204ENST00000533752 NF1P21359 2839 aa13.52□□□□□ -0.24
TSKU-204ENST00000533752 TVP23AA6NH52 213 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 PRODHO43272 600 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 TIMM8AO60220 97 aaPredicted RBP13.52□□□□□ -0.25
TSKU-204ENST00000533752 DBHP09172 617 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 SPARCP09486 303 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 RAC2P15153 192 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 KITLGP21583 273 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 ACHEP22303 614 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 TPTEP56180 551 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 DBPQ10586 325 aaPredicted RBP13.52□□□□□ -0.25
TSKU-204ENST00000533752 PCK2Q16822 640 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 KRTAP27-1Q3LI81 207 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 ACSM5Q6NUN0 579 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 OTULINQ96BN8 352 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 CENPNQ96H22 339 aaPredicted RBP13.52□□□□□ -0.25
TSKU-204ENST00000533752 MAP6Q96JE9 813 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 INTS14Q96SY0 518 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 OSBPL10Q9BXB5 764 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 BPESC1Q9GZL8 116 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 PNRC2Q9NPJ4 139 aaKnown RBP13.52□□□□□ -0.25
TSKU-204ENST00000533752 DECR2Q9NUI1 292 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 ZDHHC8Q9ULC8 765 aa13.52□□□□□ -0.25
TSKU-204ENST00000533752 FAM183AA6NL82 134 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 TPD52L2O43399 206 aaKnown RBP13.51□□□□□ -0.25
TSKU-204ENST00000533752 GLCEO94923 617 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 HPXP02790 462 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 ADH4P08319 380 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 CLUP10909 449 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 GSTT1P30711 240 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 DAPP51397 102 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 MMP15P51511 669 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 CRISP1P54107 249 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 GGTLC2Q14390 218 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 TMEM249Q2WGJ8 235 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 LINC01590Q5TEZ4 76 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 PLBD1Q6P4A8 553 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 DCXRQ7Z4W1 244 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 ZNRF4Q8WWF5 429 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 LRTOMTQ8WZ04 291 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 PTP4A1Q93096 173 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 RAB3IPQ96QF0 476 aaPredicted RBP13.51□□□□□ -0.25
TSKU-204ENST00000533752 C1QTNF5Q9BXJ0 243 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 EGLN1Q9GZT9 426 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 WDR76Q9H967 626 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 SAP30LQ9HAJ7 183 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 PURGQ9UJV8 347 aaKnown RBP13.51□□□□□ -0.25
TSKU-204ENST00000533752 STARD10Q9Y365 291 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 ABCA1O95477 2261 aa13.51□□□□□ -0.25
TSKU-204ENST00000533752 NAV3Q8IVL0 2385 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 ZNF878C9JN71 531 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms