RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 SUB1P53999 127 aaKnown RBP eCLIP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 RAB1AP62820 205 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 KIAA0141Q14154 515 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 NKAIN1Q4KMZ8 207 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 C9orf135Q5VTT2 229 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SYT13Q7L8C5 426 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 RTN4RL1Q86UN2 441 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 LINC00518Q8N0U6 118 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 OR52H1Q8NGJ2 320 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 OR2G3Q8NGZ4 309 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 APH1BQ8WW43 257 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF75AQ96N20 296 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 ADAM19Q9H013 955 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 NARFLQ9H6Q4 476 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 HEYLQ9NQ87 328 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 CGGBP1Q9UFW8 167 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SSUH2Q9Y2M2 353 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SIT1Q9Y3P8 196 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 H2AFB1P0C5Y9 115 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 GABRB1P18505 474 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 DTYMKP23919 212 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 PSMB6P28072 239 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 PNLIPRP2P54317 469 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 NDUFA6P56556 154 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 COL9A2Q14055 689 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 VAMP3Q15836 100 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 ACKR1Q16570 336 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 H3F3CQ6NXT2 135 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 PRSS45Q7RTY3 260 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 DND1Q8IYX4 353 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 NUDT9Q9BW91 350 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 PRR14Q9BWN1 585 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 TXNIPQ9H3M7 391 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 RIMS4Q9H426 269 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 TBC1D29Q9UFV1 150 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 PURGQ9UJV8 347 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 CHST2Q9Y4C5 530 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 R4GMQ9 66 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 PDE4DIPQ5VU43 2346 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 A0A1B0GV72 72 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 XRCC2O43543 280 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 FGF17O60258 216 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 TBX19O60806 448 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 AKR7A3O95154 331 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 GSTP1P09211 210 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 GNB3P16520 340 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SOX18P35713 384 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 ARR3P36575 388 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 DGCR2P98153 550 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 FAM53BQ14153 422 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SLC10A1Q14973 349 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 TOMM34Q15785 309 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 FAM74A1Q5RGS3 127 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 Q6ZNB5 142 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 FAM185AQ8N0U4 392 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 CA13Q8N1Q1 262 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 NT5CQ8TCD5 201 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 KCNE4Q8WWG9 221 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 BOD1Q96IK1 185 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF768Q9H5H4 540 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF346Q9UL40 294 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 TRAPPC4Q9Y296 219 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 NTNG1Q9Y2I2 539 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 LAMB1P07942 1786 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF891A8MT65 544 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-236ENST00000533667 SBK3P0C264 359 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 SLC2A1P11166 492 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 TAF9Q16594 264 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.38□□□□□ -1.39
CTNND1-236ENST00000533667 CALHM3Q86XJ0 350 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 TCTE3Q8IZS6 198 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 ARHGEF39Q8N4T4 335 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 CISD2Q8N5K1 135 aaKnown RBP6.38□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF321PQ8N8H1 164 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 MRGPRX4Q96LA9 322 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 PATZ1Q9HBE1 687 aaKnown RBP6.38□□□□□ -1.39
CTNND1-236ENST00000533667 SLC5A6Q9Y289 635 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 NRAPQ86VF7 1730 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 PRSS37A4D1T9 235 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 E5RGE8 158 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 SIX6O95475 246 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 PRR35P0CG20 571 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 GLULP15104 373 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 PTTG1IPP53801 180 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 FABP5Q01469 135 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 DHODHQ02127 395 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 HABP2Q14520 560 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-236ENST00000533667 PNLIPRP3Q17RR3 467 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 PHLDA2Q53GA4 152 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 H2BFWTQ7Z2G1 175 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 BAGE3Q86Y29 109 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 BAGE2Q86Y30 109 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 OXGR1Q96P68 337 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 TECTBQ96PL2 329 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 WWTR1Q9GZV5 400 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 ESRP2Q9H6T0 727 aaKnown RBP6.38□□□□□ -1.39
CTNND1-236ENST00000533667 NSG2Q9Y328 171 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 BOLA1Q9Y3E2 137 aa6.38□□□□□ -1.39
CTNND1-236ENST00000533667 CSAG2Q9Y5P2 127 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms