RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CLDND2Q8NHS1 167 aa25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 COQ7Q99807 217 aa25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 NARFLQ9H6Q4 476 aa25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 TBC1D23Q9NUY8 699 aa25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 ZDHHC8Q9ULC8 765 aa25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 AQP12BA6NM10 295 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 GYG2O15488 501 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 IFNA2P01563 188 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 HLA-DQA2P01906 255 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 FAM157CP0CG43 387 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 RGS6P49758 472 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 CDH15P55291 814 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 DNAL1Q4LDG9 190 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 AQP12AQ8IXF9 295 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 CMBLQ96DG6 245 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 DIRC2Q96SL1 478 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 DDOQ99489 341 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 CHID1Q9BWS9 393 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 CDADC1Q9BWV3 514 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 TSSK6Q9BXA6 273 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 MSL2Q9HCI7 577 aa25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 PURGQ9UJV8 347 aaKnown RBP25.75■■□□□ 1.71
SSSCA1-207ENST00000533115 J3QW42 95 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 WNT9BO14905 357 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 KITLGP21583 273 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 GK3PQ14409 553 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 FAM120AOSQ5T036 256 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 SLC18B1Q6NT16 456 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 LINC00346Q8IVM7 164 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 CYB561A3Q8NBI2 242 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 PTP4A1Q93096 173 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 ELMOD3Q96FG2 381 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 EGLN1Q9GZT9 426 aa25.74■■□□□ 1.71
SSSCA1-207ENST00000533115 ATRQ13535 2644 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 CST1P01037 141 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 HFEQ30201 348 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 ZNF362Q5T0B9 420 aaPredicted RBP25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 LNX2Q8N448 690 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 OR10G2Q8NGC3 310 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 OR2AJ1Q8NGZ0 328 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 CANT1Q8WVQ1 401 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 HAVCR1Q96D42 359 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 CYB5R1Q9UHQ9 305 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 CACNG2Q9Y698 323 aa25.73■■□□□ 1.71
SSSCA1-207ENST00000533115 CD55P08174 381 aa25.72■■□□□ 1.71
SSSCA1-207ENST00000533115 GGT2P36268 569 aa25.72■■□□□ 1.71
SSSCA1-207ENST00000533115 CFAP77Q6ZQR2 320 aa25.72■■□□□ 1.71
SSSCA1-207ENST00000533115 SLC37A3Q8NCC5 494 aa25.72■■□□□ 1.71
SSSCA1-207ENST00000533115 OR2T4Q8NH00 348 aa25.72■■□□□ 1.71
SSSCA1-207ENST00000533115 SLC7A6OSQ96CW6 309 aaPredicted RBP25.72■■□□□ 1.71
SSSCA1-207ENST00000533115 MRPL22Q9NWU5 206 aaKnown RBP25.72■■□□□ 1.71
SSSCA1-207ENST00000533115 BAIAP2Q9UQB8 552 aa25.72■■□□□ 1.71
SSSCA1-207ENST00000533115 DHRS12A0PJE2 317 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 SOX14O95416 240 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 PYCR1P32322 319 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 CDK5R2Q13319 367 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 PROKR2Q8NFJ6 384 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 OR2T33Q8NG76 320 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 OR5L1Q8NGL2 311 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 OR4Q3Q8NH05 313 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 APOBEC3DQ96AK3 386 aaPredicted RBP25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 PITX2Q99697 317 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 ARMC1Q9NVT9 282 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 TREM2Q9NZC2 230 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 KCNG2Q9UJ96 466 aa25.71■■□□□ 1.71
SSSCA1-207ENST00000533115 B4DSR2 109 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 CLDN25C9JDP6 229 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 RAC2P15153 192 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 ZNF823P16415 610 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 HOXB6P17509 224 aaKnown RBP25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 HNF1AP20823 631 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 MVKQ03426 396 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 RSPO1Q2MKA7 263 aaPredicted RBP25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 CR1LQ2VPA4 569 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 KRTAP27-1Q3LI81 207 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 AVPI1Q5T686 147 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 CD300LDQ6UXZ3 194 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 IL17RELQ6ZVW7 336 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 GIPC3Q8TF64 312 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 CCL17Q92583 94 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 NIPSNAP1Q9BPW8 284 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 PTTG3PQ9NZH4 202 aa25.7■■□□□ 1.7
SSSCA1-207ENST00000533115 LMO4P61968 165 aa25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 TNFAIP6P98066 277 aaPredicted RBP25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 ECH1Q13011 328 aa25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 FBXW12Q6X9E4 464 aa25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 Q6ZR03 302 aa25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 ZNRF4Q8WWF5 429 aa25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 FEVQ99581 238 aa25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 MDFIQ99750 246 aa25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 ATF6BQ99941 703 aa25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 RBM4Q9BWF3 364 aaKnown RBP25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 WIPI2Q9Y4P8 454 aa25.69■■□□□ 1.7
SSSCA1-207ENST00000533115 ARRDC5A6NEK1 342 aa25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 FAM157AC9JC47 383 aa25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 GNGT2O14610 69 aa25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 ERFP50548 548 aa25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 DVL1P1P54792 670 aaPredicted RBP25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 FLOT2Q14254 428 aa25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 HLXQ14774 488 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms