RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ABHD6Q9BV23 337 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 DUSP21Q9H596 190 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 NIPAL2Q9H841 368 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 NOX3Q9HBY0 568 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 AMBNQ9NP70 447 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 PNRC2Q9NPJ4 139 aaKnown RBP10.87□□□□□ -0.67
COPB1-208ENST00000532088 PLEK2Q9NYT0 353 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 DIMT1Q9UNQ2 313 aaKnown RBP10.87□□□□□ -0.67
COPB1-208ENST00000532088 EXOSC1Q9Y3B2 195 aaKnown RBP10.87□□□□□ -0.67
COPB1-208ENST00000532088 DOPEY1Q5JWR5 2465 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 LOC100289279A0A1B0GTE1 492 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 PRSS44E7EML9 344 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 XPNPEP2O43895 674 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 DOK2O60496 412 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 FBXO24O75426 580 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 SULT1C4O75897 302 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 APOC1P02654 83 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 MRPL3P09001 348 aaKnown RBP10.86□□□□□ -0.67
COPB1-208ENST00000532088 PSKH1P11801 424 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 PTAFRP25105 342 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 OTX1P32242 354 aaPredicted RBP10.86□□□□□ -0.67
COPB1-208ENST00000532088 NR1H2P55055 460 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 ACTA2P62736 377 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 GRB2P62993 217 aaKnown RBP10.86□□□□□ -0.67
COPB1-208ENST00000532088 ACTG2P63267 376 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 TUBA1BP68363 451 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 TUBA4AP68366 448 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 PIGFQ07326 219 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 CORO6Q6QEF8 472 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 TMEM108Q6UXF1 575 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 CFAP77Q6ZQR2 320 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 TUBA1AQ71U36 451 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 KCTD20Q7Z5Y7 419 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.86□□□□□ -0.67
COPB1-208ENST00000532088 ZNF584Q8IVC4 421 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 LINC00346Q8IVM7 164 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 C1orf174Q8IYL3 243 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 ZNF540Q8NDQ6 660 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 OR10H4Q8NGA5 316 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 OR1F12Q8NHA8 337 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 SLAMF6Q96DU3 332 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 TMEM80Q96HE8 168 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 OR8B4Q96RC9 309 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 SIGLEC11Q96RL6 698 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 ATF6BQ99941 703 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 COPS4Q9BT78 406 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 KCNN3Q9UGI6 736 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 COPS3Q9UNS2 423 aa10.86□□□□□ -0.67
COPB1-208ENST00000532088 IGHV1-18A0A0C4DH31 117 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 A0A1W2PQL4 384 aaPredicted RBP10.85□□□□□ -0.67
COPB1-208ENST00000532088 A0A1W2PR80 420 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 DAPL1A0PJW8 107 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 C19orf84I3L1E1 186 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 CASKO14936 926 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 CLDN1O95832 211 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 CDK1P06493 297 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 PATE4P0C8F1 98 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 STOMP27105 288 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 APLNRP35414 380 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 OPRL1P41146 370 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 RPS27P42677 84 aaKnown RBP10.85□□□□□ -0.67
COPB1-208ENST00000532088 HTR5AP47898 357 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 ZNF85Q03923 595 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 ST3GAL4Q11206 333 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 MRPL28Q13084 256 aaKnown RBP10.85□□□□□ -0.67
COPB1-208ENST00000532088 GALEQ14376 348 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 RAB39AQ14964 217 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 DAZAP2Q15038 168 aaPredicted RBP10.85□□□□□ -0.67
COPB1-208ENST00000532088 TBC1D28Q2M2D7 210 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 KCTD21Q4G0X4 260 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 BEX5Q5H9J7 111 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 ZNF684Q5T5D7 378 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 ZNF774Q6NX45 483 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 ZNF322Q6U7Q0 402 aaPredicted RBP10.85□□□□□ -0.67
COPB1-208ENST00000532088 C22orf34Q6ZV56 151 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 ZNF679Q8IYX0 411 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 SYS1Q8N2H4 156 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 ZNF786Q8N393 782 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 STX19Q8N4C7 294 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 CPEB3Q8NE35 698 aaKnown RBP10.85□□□□□ -0.67
COPB1-208ENST00000532088 SLC30A7Q8NEW0 376 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 OR10S1Q8NGN2 331 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 LINC01560Q8TB33 94 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 THEM6Q8WUY1 208 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 SPTSSAQ969W0 71 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 RADILQ96JH8 1075 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 POM121L2Q96KW2 1035 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 ZNF649Q9BS31 505 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 MROQ9BYG7 248 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 ESRP2Q9H6T0 727 aaKnown RBP10.85□□□□□ -0.67
COPB1-208ENST00000532088 CHCHD3Q9NX63 227 aaKnown RBP10.85□□□□□ -0.67
COPB1-208ENST00000532088 NPAP1Q9NZP6 1156 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 MYRFQ9Y2G1 1151 aa10.85□□□□□ -0.67
COPB1-208ENST00000532088 MEGF11A6BM72 1044 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 TRIM64A6NGJ6 449 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 ACOD1A6NK06 481 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 CECR9P0C854 216 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 MYL12AP19105 171 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 CD40P25942 277 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 PCSK6P29122 969 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms