RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PCYOX1LQ8NBM8 494 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 FAM156AQ8NDB6 213 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 SYT4Q9H2B2 425 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 TMEM165Q9HC07 324 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 CMTM6Q9NX76 183 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 IL20RAQ9UHF4 553 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 IGHV2-70DA0A0C4DH43 119 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 F5H5P2 479 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 CLDN34H7C241 214 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 MLNRO43193 412 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 SELEP16581 610 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 OMGP23515 440 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 PRSS12P56730 875 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 GNB2P62879 340 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 MAPRE2Q15555 327 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 FAM201AQ5SY85 155 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 TMPRSS11FQ6ZWK6 438 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 MOGAT3Q86VF5 341 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 BHLHE23Q8NDY6 225 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 OR8G5Q8NG78 346 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 UPRTQ96BW1 309 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 RCN3Q96D15 328 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 FAM46AQ96IP4 442 aaKnown RBP15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 COG8Q96MW5 612 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 TMEM246Q9BRR3 403 aa15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 PRKDCP78527 4128 aaKnown RBP15.41■□□□□ 0.06
SSSCA1-206ENST00000531405 SOCS2O14508 198 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 AHCYL1O43865 530 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 KHDRBS3O75525 346 aaKnown RBP15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 PLATP00750 562 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 MTNR1AP48039 350 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 LSM6P62312 80 aaKnown RBP15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 DEFA6Q01524 100 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 IFI44LQ53G44 452 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 CGB2Q6NT52 195 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 SLC27A4Q6P1M0 643 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 BTNL3Q6UXE8 466 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 LRRN1Q6UXK5 716 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 FBXW12Q6X9E4 464 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 C9orf139Q6ZV77 190 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 PTCHD4Q6ZW05 846 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 SPATC1Q76KD6 591 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 GLB1L2Q8IW92 636 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 POU5F2Q8N7G0 328 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 OR13G1Q8NGZ3 307 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 DACT3Q96B18 629 aaPredicted RBP15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 HSH2DQ96JZ2 352 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 WDR76Q9H967 626 aa15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 NMNAT1Q9HAN9 279 aaPredicted RBP15.4■□□□□ 0.06
SSSCA1-206ENST00000531405 IFNL4K9M1U5 179 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 CXCR6O00574 342 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 PPIAL4GP0DN37 164 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 SDHAP31040 664 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 PMELP40967 661 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 SRP9P49458 86 aaKnown RBP15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 RGS6P49758 472 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 DBPQ10586 325 aaPredicted RBP15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 MEP1BQ16820 701 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 BRD3OSQ6XYD6 125 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 RRM2BQ7LG56 351 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 TSEN54Q7Z6J9 526 aaKnown RBP15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 RAB40AQ8WXH6 277 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 TMIGD2Q96BF3 282 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 NEIL1Q96FI4 390 aaPredicted RBP15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 ZNF582Q96NG8 517 aaPredicted RBP15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 NUAK2Q9H093 628 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 FGFR1OP2Q9NVK5 253 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 VSX1Q9NZR4 365 aaPredicted RBP15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 MIOXQ9UGB7 285 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 POLR1DQ9Y2S0 133 aa15.39■□□□□ 0.05
SSSCA1-206ENST00000531405 POM121CA8CG34 1229 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 HOXA3O43365 443 aaPredicted RBP15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 PTP4A3O75365 173 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 NDUFB2O95178 105 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 HLA-DPB1P04440 258 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 TROVE2P10155 538 aaKnown RBP eCLIP15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 CENPAP49450 140 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 LIPEQ05469 1076 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 ZNF404Q494X3 552 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 PDLIM3Q53GG5 364 aaPredicted RBP15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 CORO6Q6QEF8 472 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 FKBP9P1Q75LS8 142 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 CBLL1Q75N03 491 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 SLC15A3Q8IY34 581 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 C19orf18Q8NEA5 215 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 OR5L1Q8NGL2 311 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 SLC7A13Q8TCU3 470 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 APOBEC3DQ96AK3 386 aaPredicted RBP15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 TSSK2Q96PF2 358 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 SLC30A2Q9BRI3 323 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 NDEL1Q9GZM8 345 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 NRIP3Q9NQ35 241 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 TNFRSF19Q9NS68 423 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 MRGBPQ9NV56 204 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 ARMCX1Q9P291 453 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 SIGLEC7Q9Y286 467 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 IER3IP1Q9Y5U9 82 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 LHFPL6Q9Y693 200 aa15.38■□□□□ 0.05
SSSCA1-206ENST00000531405 IQCF6A8MYZ5 107 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms