RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TMEM154Q6P9G4 183 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 VHLLQ6RSH7 139 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 DPY19L4Q7Z388 723 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 DCXRQ7Z4W1 244 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 OR6N2Q8NGY6 317 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 TMEM171Q8WVE6 324 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 MBD6Q96DN6 1003 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 ATF6BQ99941 703 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 CXorf56Q9H5V9 222 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 PNRC2Q9NPJ4 139 aaKnown RBP13.19□□□□□ -0.3
CCS-206ENST00000530961 TUBG2Q9NRH3 451 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 CBLN4Q9NTU7 201 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 DDX28Q9NUL7 540 aaKnown RBP13.19□□□□□ -0.3
CCS-206ENST00000530961 TBCCD1Q9NVR7 557 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 WARS2Q9UGM6 360 aaKnown RBP13.19□□□□□ -0.3
CCS-206ENST00000530961 FBXO9Q9UK97 447 aaPredicted RBP13.19□□□□□ -0.3
CCS-206ENST00000530961 LAMP3Q9UQV4 416 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 PLEKHA6Q9Y2H5 1048 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 CMAHPQ9Y471 501 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 SNTNA6NMZ2 147 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 B9A039 149 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 J3QW42 95 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 SELENOFO60613 162 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 ABHD16AO95870 558 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 HTR1FP30939 366 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 RPS27P42677 84 aaKnown RBP13.18□□□□□ -0.3
CCS-206ENST00000530961 SLC15A1P46059 708 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 EFNB3Q15768 340 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 OCLNQ16625 522 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 KRTAP27-1Q3LI81 207 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 SLC16A9Q7RTY1 509 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 BCDIN3DQ7Z5W3 292 aaKnown RBP13.18□□□□□ -0.3
CCS-206ENST00000530961 OTOSQ8NHW6 89 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 IGFBPL1Q8WX77 278 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 SPTSSAQ969W0 71 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 Q96MT0 163 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 COG8Q96MW5 612 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 ZNF582Q96NG8 517 aaPredicted RBP13.18□□□□□ -0.3
CCS-206ENST00000530961 MNTQ99583 582 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 MDFIQ99750 246 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 APOL4Q9BPW4 351 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 TRAF4Q9BUZ4 470 aaPredicted RBP13.18□□□□□ -0.3
CCS-206ENST00000530961 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 YIPF3Q9GZM5 350 aa13.18□□□□□ -0.3
CCS-206ENST00000530961 BEX4Q9NWD9 120 aaPredicted RBP13.18□□□□□ -0.3
CCS-206ENST00000530961 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCS-206ENST00000530961 H0YJX3 145 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 SMPD2O60906 423 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 LCKP06239 509 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 FAM157BP0CG42 384 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 WNT5AP41221 380 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 EVX1P49640 407 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 RGS6P49758 472 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 SELENOVP59797 346 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 POU4F2Q12837 409 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 EIF2B1Q14232 305 aaKnown RBP13.17□□□□□ -0.3
CCS-206ENST00000530961 RGS7BPQ6MZT1 257 aaPredicted RBP13.17□□□□□ -0.3
CCS-206ENST00000530961 DHRSXQ8N5I4 330 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 RHOXF1Q8NHV9 184 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 ST7LQ8TDW4 575 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 UBE2FQ969M7 185 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 SLAMF6Q96DU3 332 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 CNN2Q99439 309 aaKnown RBP13.17□□□□□ -0.3
CCS-206ENST00000530961 ABHD6Q9BV23 337 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 PLK3Q9H4B4 646 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 CENPMQ9NSP4 180 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 GRIP1Q9Y3R0 1128 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 TMEM14AQ9Y6G1 99 aa13.17□□□□□ -0.3
CCS-206ENST00000530961 ZNF878C9JN71 531 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 F5H5K5 113 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 H0YAE9 185 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 H3BSA7 217 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 GPRIN2O60269 458 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 CD8AP01732 235 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 LYNP07948 512 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 DBHP09172 617 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 PSKH1P11801 424 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 ALOX5APP20292 161 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 NAA10P41227 235 aaPredicted RBP13.16□□□□□ -0.3
CCS-206ENST00000530961 TPTEP56180 551 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 GRB2P62993 217 aaKnown RBP13.16□□□□□ -0.3
CCS-206ENST00000530961 IL18R1Q13478 541 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 TAF13Q15543 124 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 SWI5Q1ZZU3 235 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 RSPO1Q2MKA7 263 aaPredicted RBP13.16□□□□□ -0.3
CCS-206ENST00000530961 DEFB113Q30KQ7 82 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 ZNF101Q8IZC7 436 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 OR5L1Q8NGL2 311 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 OR10S1Q8NGN2 331 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 OR1J1Q8NGS3 322 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 ABHD4Q8TB40 342 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 THEM6Q8WUY1 208 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 RNF133Q8WVZ7 376 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 CYGBQ8WWM9 190 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 MRPL24Q96A35 216 aaKnown RBP13.16□□□□□ -0.3
CCS-206ENST00000530961 KCNJ15Q99712 375 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 COPS4Q9BT78 406 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 CLN6Q9NWW5 311 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms