RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TFAP2EQ6VUC0 442 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 ZYG11AQ6WRX3 759 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 CNPY4Q8N129 248 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 GABRG1Q8N1C3 465 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 ZNF619Q8N2I2 560 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 COX18Q8N8Q8 333 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 BANPQ8N9N5 519 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 NOA1Q8NC60 698 aaKnown RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 MNS1Q8NEH6 495 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 RAB3IL1Q8TBN0 382 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 ABHD3Q8WU67 409 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 GATAD1Q8WUU5 269 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 GTF3AQ92664 365 aaKnown RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 OSTF1Q92882 214 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 CPNE4Q96A23 557 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 CIDECQ96AQ7 238 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 ZBED6CLQ96FA7 236 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 OTUB1Q96FW1 271 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 CHMP6Q96FZ7 201 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 CCT7Q99832 543 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 POTEKPQ9BYX7 375 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 LRTM1Q9HBL6 345 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 NGBQ9NPG2 151 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 TIGARQ9NQ88 270 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 UBQLN4Q9NRR5 601 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 PSMC3IPQ9P2W1 217 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 LIPT1Q9Y234 373 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 RAI1Q7Z5J4 1906 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 AKAP6Q13023 2319 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 FN1P02751 2386 aaKnown RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 A0A1W2PQD3 144 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 G3V2L1 256 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 KIF2AO00139 706 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 SLC28A1O00337 649 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 RIPK2O43353 540 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 GCM2O75603 506 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 HSPA4LO95757 839 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 NUDT14O95848 222 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 CSN3P07498 182 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 SOD3P08294 240 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 UROSP10746 265 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 NEFHP12036 1026 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 SDC1P18827 310 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 ATP6V1C1P21283 382 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 SHC1P29353 583 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 ACVR1BP36896 505 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 CARD18P57730 90 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 RPL38P63173 70 aaKnown RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 ZNF117Q03924 483 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 BSPH1Q075Z2 132 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 KIAA0040Q15053 153 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 TSC22D1Q15714 1073 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 TAB1Q15750 504 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 CD226Q15762 336 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 ZNF74Q16587 644 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 DUSP5Q16690 384 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 GLIPR1L2Q4G1C9 344 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 NCMAPQ5T1S8 102 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 CCNJQ5T5M9 372 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 CLEC6AQ6EIG7 209 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 ZCCHC12Q6PEW1 402 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 TRMT10CQ7L0Y3 403 aaKnown RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 FCRLAQ7L513 359 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 NUFIP2Q7Z417 695 aaKnown RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 TUSC5Q8IXB3 177 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 FAM110BQ8TC76 370 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 SPSB1Q96BD6 273 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 FAM71F1Q96KD3 344 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 C16orf45Q96MC5 204 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 TSSK3Q96PN8 268 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 ZNF300Q96RE9 604 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 NKX3-1Q99801 234 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 SRXN1Q9BYN0 137 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 REG4Q9BYZ8 158 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 REEP4Q9H6H4 257 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 Q9H8V8 135 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 RPS10P5Q9NQ39 176 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 ZCCHC3Q9NUD5 404 aaKnown RBP5.61□□□□□ -1.51
CSDE1-213ENST00000530784 C1orf109Q9NX04 203 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 TBK1Q9UHD2 729 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 DCDC2Q9UHG0 476 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 EMCNQ9ULC0 261 aa5.61□□□□□ -1.51
CSDE1-213ENST00000530784 RNF212BA8MTL3 300 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 H3BNH8 94 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 TLX2O43763 284 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-213ENST00000530784 CD5LO43866 347 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 TBX19O60806 448 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 YES1P07947 543 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 PRKACGP22612 351 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 HPCAL1P37235 193 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 FRKP42685 505 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-213ENST00000530784 ASMTP46597 345 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 P2RX1P51575 399 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 DNAJB13P59910 316 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 KRTAP10-3P60369 221 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 SELENBP1Q13228 472 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 PDE7AQ13946 482 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 NPTX1Q15818 432 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 STK11Q15831 433 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 CCDC153Q494R4 210 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms