RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 UTS2O95399 124 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 CD160O95971 181 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 NR2C1P13056 603 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 NQO2P16083 231 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 CTRB1P17538 263 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 BGNP21810 368 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 AK4P27144 223 aaPredicted RBP3.02□□□□□ -1.93
C11orf88-204ENST00000529661 IL12BP29460 328 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 GPR1P46091 355 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 NMUP48645 174 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 ATP5J2P56134 94 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 ACTA2P62736 377 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 ACTG2P63267 376 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 ACTC1P68032 377 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 ACTA1P68133 377 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 RSPO1Q2MKA7 263 aaPredicted RBP3.02□□□□□ -1.93
C11orf88-204ENST00000529661 PPM1LQ5SGD2 360 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF470Q6ECI4 717 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 TMPRSS11AQ6ZMR5 421 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 TMEM179Q6ZVK1 233 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 C6orf120Q7Z4R8 191 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 CMTM1Q8IZ96 169 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 PRELID2Q8N945 189 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 OR7G1Q8NGA0 311 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 OR56A4Q8NGH8 313 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 LYPD6BQ8NI32 183 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 NUBPLQ8TB37 319 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF502Q8TBZ5 544 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 BLOC1S5Q8TDH9 187 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 CA5BP1Q8WTZ4 195 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 CAPSLQ8WWF8 208 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 RNF185Q96GF1 192 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 P2RX4Q99571 388 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 MAP1LC3CQ9BXW4 147 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 GABARAPL3Q9BY60 117 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 ANGPTL4Q9BY76 406 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 DEFB129Q9H1M3 183 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 PIGUQ9H490 435 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 KIR3DX1Q9H7L2 352 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 CD209Q9NNX6 404 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 SAMSN1Q9NSI8 373 aaKnown RBP3.02□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF226Q9NYT6 803 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 GOLT1BQ9Y3E0 138 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 SBNO1A3KN83 1393 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 JCADQ9P266 1359 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF816-ZNF321PA0A0X1KG74 233 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 PINLYPA6NC86 204 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 RNASEK-C17orf49H0YIS7 233 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 LAD1O00515 517 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 RFXANKO14593 260 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 KLHL2O95198 593 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 LCA5LO95447 670 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 CST4P01036 141 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 IGLV2-23P01705 113 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 BGLAPP02818 100 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 ZDHHC11BP0C7U3 371 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 GABRR2P28476 465 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 NUTF2P61970 127 aaKnown RBP3.01□□□□□ -1.93
C11orf88-204ENST00000529661 SLC25A11Q02978 314 aaKnown RBP3.01□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF33AQ06730 810 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 SIGLEC14Q08ET2 396 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 TWF1Q12792 350 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 STX3Q13277 289 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 SF3A2Q15428 464 aaKnown RBP3.01□□□□□ -1.93
C11orf88-204ENST00000529661 MPPED2Q15777 294 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 RPEL1Q2QD12 228 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 PTPN20Q4JDL3 420 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 PRMT9Q6P2P2 845 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 CAMK2N1Q7Z7J9 78 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 SYS1Q8N2H4 156 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 CCDC54Q8NEL0 328 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 ACTRT1Q8TDG2 376 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 TCP10LQ8TDR4 215 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 TNFRSF14Q92956 283 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 ISOC2Q96AB3 205 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 CHID1Q9BWS9 393 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 HRASLS2Q9NWW9 162 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 EURLQ9NYK6 297 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 IL20Q9NYY1 176 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 STMN3Q9NZ72 180 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 PCYOX1Q9UHG3 505 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 DDX19BQ9UMR2 479 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 SLC22A14Q9Y267 594 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 POFUT2Q9Y2G5 429 aa3.01□□□□□ -1.93
C11orf88-204ENST00000529661 GAKO14976 1311 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 MAPK8IP3Q9UPT6 1336 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 A0A1W2PRF3 423 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 A0A1W2PRM7 423 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 PLAC8L1A1L4L8 177 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 SLC22A20A6NK97 555 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 FAM166BA8MTA8 275 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 HIDE1A8MVS5 230 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 TRIM49D1C9J1S8 452 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 H0YHG0 523 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 NDUFS6O75380 124 aaKnown RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 ZMPSTE24O75844 475 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 SRP72O76094 671 aaKnown RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 FADS2O95864 444 aaKnown RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 RPN2P04844 631 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 TACSTD2P09758 323 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms