RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 TMEM129A0AVI4 362 aa19.12■□□□□ 0.65
PACSIN3-205ENST00000528462 GRB2P62993 217 aaKnown RBP19.12■□□□□ 0.65
PACSIN3-205ENST00000528462 RAB39AQ14964 217 aa19.12■□□□□ 0.65
PACSIN3-205ENST00000528462 IL17RDQ8NFM7 739 aa19.12■□□□□ 0.65
PACSIN3-205ENST00000528462 SNX33Q8WV41 574 aa19.12■□□□□ 0.65
PACSIN3-205ENST00000528462 CENPMQ9NSP4 180 aa19.12■□□□□ 0.65
PACSIN3-205ENST00000528462 SLCO1C1Q9NYB5 712 aa19.12■□□□□ 0.65
PACSIN3-205ENST00000528462 NPAP1Q9NZP6 1156 aa19.12■□□□□ 0.65
PACSIN3-205ENST00000528462 ABHD16AO95870 558 aa19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 STOMP27105 288 aa19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 HTR5AP47898 357 aa19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 RSPO1Q2MKA7 263 aaPredicted RBP19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 LRRN1Q6UXK5 716 aa19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 KRT77Q7Z794 578 aa19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 OR52N1Q8NH53 320 aa19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 POM121L2Q96KW2 1035 aa19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 CLEC2DQ9UHP7 191 aa19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 MRM2Q9UI43 246 aaKnown RBP19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 ERGIC3Q9Y282 383 aa19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 GCN1Q92616 2671 aaKnown RBP19.11■□□□□ 0.65
PACSIN3-205ENST00000528462 METTL15A6NJ78 407 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 KRT8P05787 483 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 H2BFMP0C1H6 154 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 APEX1P27695 318 aaKnown RBP19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 IDH3GP51553 393 aaPredicted RBP19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 ZNF773Q6PK81 442 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 TMPRSS11AQ6ZMR5 421 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 ZNF485Q8NCK3 441 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 MS4A3Q96HJ5 214 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 KCNJ15Q99712 375 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 LRP12Q9Y561 859 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 CADP27708 2225 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 LOC100509620A0A075B734 347 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 IGHV1-18A0A0C4DH31 117 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 ICMTO60725 284 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 APOC1P02654 83 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 MT-ND2P03891 347 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 TACSTD2P09758 323 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 APLNRP35414 380 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 RIDAP52758 137 aaKnown RBP19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 DMRTC2Q8IXT2 367 aaPredicted RBP19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 KLHL36Q8N4N3 616 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 NANOGP1Q8N7R0 232 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 SLC30A7Q8NEW0 376 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 LINC01560Q8TB33 94 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 HAVCR2Q8TDQ0 301 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 SPTSSAQ969W0 71 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 DCLRE1CQ96SD1 692 aaKnown RBP19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 C1QTNF6Q9BXI9 259 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 ELOVL3Q9HB03 270 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 SLC24A3Q9HC58 644 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 IKZF2Q9UKS7 526 aa19.1■□□□□ 0.65
PACSIN3-205ENST00000528462 C19orf84I3L1E1 186 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 CELA3BP08861 270 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 CECR9P0C854 216 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 GDI2P50395 445 aaKnown RBP19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 ZNF83P51522 516 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 TAF13Q15543 124 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 TBCEQ15813 527 aaPredicted RBP19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 MYPOPQ86VE0 399 aaPredicted RBP19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 WFDC8Q8IUA0 241 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 OR1J2Q8NGS2 313 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 MND1Q9BWT6 205 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 TTTY10Q9BZA0 68 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 CCDC90BQ9GZT6 254 aa19.09■□□□□ 0.65
PACSIN3-205ENST00000528462 PSMD9O00233 223 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 MT-ND5P03915 603 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 PTAFRP25105 342 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 KIR2DL3P43628 341 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 MMP16P51512 607 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 CDH15P55291 814 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 OR12D2P58182 307 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 MRPL28Q13084 256 aaKnown RBP19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 TBC1D28Q2M2D7 210 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 LIPNQ5VXI9 398 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 TMEM108Q6UXF1 575 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 SPATC1Q76KD6 591 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 FAM220AQ7Z4H9 259 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 SPARTQ8N0X7 666 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 FAM222BQ8WU58 562 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 ZC3HAV1LQ96H79 300 aaKnown RBP19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 C4orf36Q96KX1 117 aa19.08■□□□□ 0.65
PACSIN3-205ENST00000528462 C5orf49A4QMS7 147 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 M0R135 149 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 MYL12BO14950 172 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 MAGEB4O15481 346 aaPredicted RBP19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 ZNF35P13682 527 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 HSD11B1P28845 292 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 TPTEP56180 551 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 SNTB1Q13884 538 aaKnown RBP19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 DRAM2Q6UX65 266 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 SVOPQ8N4V2 548 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 TSPAN14Q8NG11 270 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 ZNF799Q96GE5 643 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 SPOCK3Q9BQ16 436 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 ISG20L2Q9H9L3 353 aaKnown RBP19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 GNG8Q9UK08 70 aa19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 LSM2Q9Y333 95 aaKnown RBP19.07■□□□□ 0.64
PACSIN3-205ENST00000528462 SNX5Q9Y5X3 404 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms