RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 LCN2P80188 198 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 AQP6Q13520 282 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 KRR1Q13601 381 aaKnown RBP8.89□□□□□ -0.99
CPSF1-203ENST00000527916 SEC23BQ15437 767 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 TUSC1Q2TAM9 212 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 HFEQ30201 348 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 ZMAT1Q5H9K5 638 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 TMEM255AQ5JRV8 349 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 FGD3Q5JSP0 725 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 PGM2L1Q6PCE3 622 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 SMARCD3Q6STE5 483 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 USP51Q70EK9 711 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 RNF148Q8N7C7 305 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 NPEPL1Q8NDH3 523 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 ABHD4Q8TB40 342 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 ST7LQ8TDW4 575 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 IPCEF1Q8WWN9 437 aaPredicted RBP8.89□□□□□ -0.99
CPSF1-203ENST00000527916 UBE2FQ969M7 185 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 MCUR1Q96AQ8 359 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 TMIGD2Q96BF3 282 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 ELMOD3Q96FG2 381 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 RSRC1Q96IZ7 334 aaKnown RBP8.89□□□□□ -0.99
CPSF1-203ENST00000527916 FAM107BQ9H098 131 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 SYT4Q9H2B2 425 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 SAP30LQ9HAJ7 183 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 IL1RAPQ9NPH3 570 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 TAGLN3Q9UI15 199 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 ATPIF1Q9UII2 106 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 WIPI2Q9Y4P8 454 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 IER3IP1Q9Y5U9 82 aa8.89□□□□□ -0.99
CPSF1-203ENST00000527916 H7C1C5 153 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 J3QW42 95 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 FOXH1O75593 365 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 DIRAS1O95057 198 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 ABHD16AO95870 558 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 GSTM3P21266 225 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 IFNGR2P38484 337 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 CDKN2AP42771 156 aaKnown RBP8.88□□□□□ -0.99
CPSF1-203ENST00000527916 MTNR1AP48039 350 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 MNAT1P51948 309 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 HMGA2P52926 109 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 LCN6P62502 163 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 SLC3A1Q07837 685 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 PSG7Q13046 419 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 SLC9A3R2Q15599 337 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 RFX4Q33E94 735 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 ZNF362Q5T0B9 420 aaPredicted RBP8.88□□□□□ -0.99
CPSF1-203ENST00000527916 SPATA46Q5T0L3 261 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 C1orf94Q6P1W5 598 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 C16orf89Q6UX73 402 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 RFPL4BQ6ZWI9 263 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 SPATC1Q76KD6 591 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 VASH1Q7L8A9 365 aaPredicted RBP8.88□□□□□ -0.99
CPSF1-203ENST00000527916 OR52J3Q8NH60 311 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 PTP4A1Q93096 173 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 RASD2Q96D21 266 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 C1orf147Q96MC9 270 aaPredicted RBP8.88□□□□□ -0.99
CPSF1-203ENST00000527916 NSMCE2Q96MF7 247 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 DCLRE1CQ96SD1 692 aaKnown RBP8.88□□□□□ -0.99
CPSF1-203ENST00000527916 CDRT15Q96T59 188 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 EGLN1Q9GZT9 426 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 MS4A7Q9GZW8 240 aaPredicted RBP8.88□□□□□ -0.99
CPSF1-203ENST00000527916 NUAK2Q9H093 628 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 BEX1Q9HBH7 125 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 EMC7Q9NPA0 242 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 PDP1Q9P0J1 537 aaPredicted RBP8.88□□□□□ -0.99
CPSF1-203ENST00000527916 ZNF69Q9UC07 566 aa8.88□□□□□ -0.99
CPSF1-203ENST00000527916 COA3Q9Y2R0 106 aaPredicted RBP8.88□□□□□ -0.99
CPSF1-203ENST00000527916 KMT2CQ8NEZ4 4911 aaKnown RBP8.87□□□□□ -0.99
CPSF1-203ENST00000527916 OR6C6A6NF89 314 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 ZSCAN5BA6NJL1 495 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 SOCS2O14508 198 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 SPRY3O43610 288 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 IDH3BO43837 385 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 DOK2O60496 412 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 KRT36O76013 467 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 UBOX5O94941 541 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 FABP3P05413 133 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 KITLGP21583 273 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 FPR3P25089 353 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 SLC6A6P31641 620 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 HTR5AP47898 357 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 GSSP48637 474 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 RGS6P49758 472 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 GNGT1P63211 74 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 HIST1H3AP68431 136 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 CDK5R2Q13319 367 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 TSTQ16762 297 aaKnown RBP8.87□□□□□ -0.99
CPSF1-203ENST00000527916 CCDC92Q53HC0 331 aaPredicted RBP8.87□□□□□ -0.99
CPSF1-203ENST00000527916 MTX3Q5HYI7 312 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 HIST2H3PS2Q5TEC6 136 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 C16orf87Q6PH81 154 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 DNM1P34Q6PK57 102 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 BRICD5Q6PL45 260 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 PTCHD4Q6ZW05 846 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 HIST2H3AQ71DI3 136 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 GJC3Q8NFK1 279 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 OR4F5Q8NH21 305 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 OR1F12Q8NHA8 337 aa8.87□□□□□ -0.99
CPSF1-203ENST00000527916 WFDC12Q8WWY7 111 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms