RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ELOVL3Q9HB03 270 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 CLN6Q9NWW5 311 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 POLQO75417 2590 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 LRBAP50851 2863 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 NOTCH2Q04721 2471 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 NAV2Q8IVL1 2488 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 H3BSA7 217 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 PHYHO14832 338 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 LYNP07948 512 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 SBK2P0C263 348 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 DANCRP0C864 163 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 TTKP33981 857 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 WNT5AP41221 380 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 SLC15A1P46059 708 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 MTNR1AP48039 350 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 HSPA13P48723 471 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 AQP4P55087 323 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 GRB2P62993 217 aaKnown RBP17.9■□□□□ 0.46
CD44-222ENST00000526025 MAD2L1BPQ15013 274 aaPredicted RBP17.9■□□□□ 0.46
CD44-222ENST00000526025 KRT80Q6KB66 452 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 USP51Q70EK9 711 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 DTX2Q86UW9 622 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 SMAP2Q8WU79 429 aaPredicted RBP17.9■□□□□ 0.46
CD44-222ENST00000526025 TMEM171Q8WVE6 324 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 IGFBPL1Q8WX77 278 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 ASB17Q8WXJ9 295 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 NINJ1Q92982 152 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 SPTSSAQ969W0 71 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 C4orf45Q96LM5 186 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 COG8Q96MW5 612 aa17.9■□□□□ 0.46
CD44-222ENST00000526025 SMPD2O60906 423 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 RAF1P04049 648 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 CCNOP22674 350 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 ISL1P61371 349 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 EFNB3Q15768 340 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 RSPO1Q2MKA7 263 aaPredicted RBP17.89■□□□□ 0.45
CD44-222ENST00000526025 DEGS2Q6QHC5 323 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 FBXL14Q8N1E6 418 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 APH1BQ8WW43 257 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 LAMP5Q9UJQ1 280 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 FBXO9Q9UK97 447 aaPredicted RBP17.89■□□□□ 0.45
CD44-222ENST00000526025 ARFGEF3Q5TH69 2177 aa17.89■□□□□ 0.45
CD44-222ENST00000526025 ABHD16AO95870 558 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 APOC1P02654 83 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 THBS4P35443 961 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 VHLP40337 213 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 OPRL1P41146 370 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 EVX1P49640 407 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 FABP6P51161 128 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 TPTEP56180 551 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 IL5RAQ01344 420 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 ADIPOQQ15848 244 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 AGAP6Q5VW22 663 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 TMEM154Q6P9G4 183 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 KCTD18Q6PI47 426 aaPredicted RBP17.88■□□□□ 0.45
CD44-222ENST00000526025 DRAM2Q6UX65 266 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 COLCA1Q6ZS62 124 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 SLC35F2Q8IXU6 374 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 ZNF101Q8IZC7 436 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 C8orf59Q8N0T1 100 aaPredicted RBP17.88■□□□□ 0.45
CD44-222ENST00000526025 OR51G2Q8NGK0 314 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 FBLIM1Q8WUP2 373 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 KCNJ15Q99712 375 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 COPS4Q9BT78 406 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 RASSF4Q9H2L5 321 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 NIPAL2Q9H841 368 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 ST6GALNAC2Q9UJ37 374 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 CMAHPQ9Y471 501 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 PCDHGB1Q9Y5G3 927 aa17.88■□□□□ 0.45
CD44-222ENST00000526025 WBP4O75554 376 aaKnown RBP17.87■□□□□ 0.45
CD44-222ENST00000526025 CLIC3O95833 236 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 MRPL3P09001 348 aaKnown RBP17.87■□□□□ 0.45
CD44-222ENST00000526025 DBHP09172 617 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 ACSM4P0C7M7 580 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 OR2T7P0C7T2 308 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 SERPINF1P36955 418 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 ROM1Q03395 351 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 MUC15Q8N387 334 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 OR2T27Q8NH04 317 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 SLC7A6Q92536 515 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 PIGTQ969N2 578 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 APOBEC3DQ96AK3 386 aaPredicted RBP17.87■□□□□ 0.45
CD44-222ENST00000526025 AMELYQ99218 206 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 TRAF4Q9BUZ4 470 aaPredicted RBP17.87■□□□□ 0.45
CD44-222ENST00000526025 C1QTNF5Q9BXJ0 243 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 CBLN4Q9NTU7 201 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 MRPS18AQ9NVS2 196 aaKnown RBP17.87■□□□□ 0.45
CD44-222ENST00000526025 GRIP1Q9Y3R0 1128 aa17.87■□□□□ 0.45
CD44-222ENST00000526025 RPL36Q9Y3U8 105 aaKnown RBP17.87■□□□□ 0.45
CD44-222ENST00000526025 B9A039 149 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 M0R135 149 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 GPRIN2O60269 458 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 ZNF254O75437 659 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 ATE1O95260 518 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 OR4A8P0C604 315 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 FAM157BP0CG42 384 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 ZNF250P15622 560 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 ZNF91Q05481 1191 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 TAF13Q15543 124 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 RGS7BPQ6MZT1 257 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms