RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PLEKHA8Q96JA3 519 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 TNFRSF19Q9NS68 423 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 CDC42EP2O14613 210 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 FFAR1O14842 300 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 IFNW1P05000 195 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 ZNF26P17031 533 aaPredicted RBP20.01■□□□□ 0.79
USP47-205ENST00000525257 CPT2P23786 658 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 SRP9P49458 86 aaKnown RBP20.01■□□□□ 0.79
USP47-205ENST00000525257 SRSF4Q08170 494 aaKnown RBP20.01■□□□□ 0.79
USP47-205ENST00000525257 DEFB112Q30KQ8 113 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 CCDC92Q53HC0 331 aaPredicted RBP20.01■□□□□ 0.79
USP47-205ENST00000525257 COQ5Q5HYK3 327 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 FAM201AQ5SY85 155 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 TBPL2Q6SJ96 375 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 FBXW12Q6X9E4 464 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 ZNF730Q6ZMV8 503 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 PCYOX1LQ8NBM8 494 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 BHLHE23Q8NDY6 225 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 OR8B3Q8NGG8 313 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 OR10S1Q8NGN2 331 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 OR13G1Q8NGZ3 307 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 ACOT11Q8WXI4 607 aaPredicted RBP20.01■□□□□ 0.79
USP47-205ENST00000525257 LZICQ8WZA0 190 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 ZDHHC16Q969W1 377 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 RASD2Q96D21 266 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 OR8B2Q96RD0 313 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 SIKE1Q9BRV8 207 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 TMEM120AQ9BXJ8 343 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 MMP24Q9Y5R2 645 aa20.01■□□□□ 0.79
USP47-205ENST00000525257 A0A087WUU8 490 aa20■□□□□ 0.79
USP47-205ENST00000525257 F5H5P2 479 aa20■□□□□ 0.79
USP47-205ENST00000525257 MLNRO43193 412 aa20■□□□□ 0.79
USP47-205ENST00000525257 AHCYL1O43865 530 aa20■□□□□ 0.79
USP47-205ENST00000525257 NPPAP01160 153 aa20■□□□□ 0.79
USP47-205ENST00000525257 PITPNBP48739 271 aa20■□□□□ 0.79
USP47-205ENST00000525257 ZNF404Q494X3 552 aa20■□□□□ 0.79
USP47-205ENST00000525257 ZBED5Q49AG3 693 aa20■□□□□ 0.79
USP47-205ENST00000525257 FAM122BQ7Z309 247 aa20■□□□□ 0.79
USP47-205ENST00000525257 OR5L1Q8NGL2 311 aa20■□□□□ 0.79
USP47-205ENST00000525257 ZNF582Q96NG8 517 aaPredicted RBP20■□□□□ 0.79
USP47-205ENST00000525257 NUDT16L1Q9BRJ7 211 aaKnown RBP20■□□□□ 0.79
USP47-205ENST00000525257 SYT4Q9H2B2 425 aa20■□□□□ 0.79
USP47-205ENST00000525257 COA3Q9Y2R0 106 aaPredicted RBP20■□□□□ 0.79
USP47-205ENST00000525257 KIR2DS1A0A191URI9 304 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 FAM181BA6NEQ2 426 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 J3QW42 95 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 IMPA2O14732 288 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 RER1O15258 196 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 SLC16A7O60669 478 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 KNG1P01042 644 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 SELEP16581 610 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 RGS6P49758 472 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 LSM6P62312 80 aaKnown RBP19.99■□□□□ 0.79
USP47-205ENST00000525257 KRR1Q13601 381 aaKnown RBP19.99■□□□□ 0.79
USP47-205ENST00000525257 MBOAT2Q6ZWT7 520 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 NLRC3Q7RTR2 1065 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 GLB1L2Q8IW92 636 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 RNF113BQ8IZP6 322 aaKnown RBP19.99■□□□□ 0.79
USP47-205ENST00000525257 KIR3DL3Q8N743 410 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 FAM156AQ8NDB6 213 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 WFDC12Q8WWY7 111 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 POLR1DQ9Y2S0 133 aa19.99■□□□□ 0.79
USP47-205ENST00000525257 ELOVL7A1L3X0 281 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 LRRC30A6NM36 301 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 BBIP1A8MTZ0 92 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 KHDRBS3O75525 346 aaKnown RBP19.98■□□□□ 0.79
USP47-205ENST00000525257 FGF12P61328 243 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 KLF10Q13118 480 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 FITM2Q8N6M3 262 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 APOBEC3DQ96AK3 386 aaPredicted RBP19.98■□□□□ 0.79
USP47-205ENST00000525257 SLC30A2Q9BRI3 323 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 CDADC1Q9BWV3 514 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 NDEL1Q9GZM8 345 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 WDR76Q9H967 626 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 MARCH7Q9H992 704 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 GMPR2Q9P2T1 348 aaKnown RBP19.98■□□□□ 0.79
USP47-205ENST00000525257 CLN8Q9UBY8 286 aa19.98■□□□□ 0.79
USP47-205ENST00000525257 SRRM5B3KS81 715 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 ZNF682O95780 498 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 PMELP40967 661 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 RAG2P55895 527 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 ZNF181Q2M3W8 571 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 FIP1L1Q6UN15 594 aaKnown RBP19.97■□□□□ 0.79
USP47-205ENST00000525257 LYPD2Q6UXB3 125 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 C17orf107Q6ZR85 190 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 TMPRSS11FQ6ZWK6 438 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.97■□□□□ 0.79
USP47-205ENST00000525257 C1orf87Q8N0U7 546 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 BEX1Q9HBH7 125 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 GID8Q9NWU2 228 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 PDP1Q9P0J1 537 aaPredicted RBP19.97■□□□□ 0.79
USP47-205ENST00000525257 ATPIF1Q9UII2 106 aa19.97■□□□□ 0.79
USP47-205ENST00000525257 LOC100653049A0A140TA62 436 aa19.96■□□□□ 0.79
USP47-205ENST00000525257 IQCF6A8MYZ5 107 aa19.96■□□□□ 0.79
USP47-205ENST00000525257 KRT34O76011 436 aa19.96■□□□□ 0.79
USP47-205ENST00000525257 HLA-DPB1P04440 258 aa19.96■□□□□ 0.79
USP47-205ENST00000525257 SDHAP31040 664 aa19.96■□□□□ 0.79
USP47-205ENST00000525257 PRSS12P56730 875 aa19.96■□□□□ 0.79
USP47-205ENST00000525257 MAPRE2Q15555 327 aa19.96■□□□□ 0.79
USP47-205ENST00000525257 GPR157Q5UAW9 335 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms