RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 FOSL1P15407 271 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF250P15622 560 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC25A16P16260 332 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 GGT2P36268 569 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ATP6V1E1P36543 226 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 NAA10P41227 235 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ALDH3B1P43353 468 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF81P51508 661 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ALDH3A2P51648 485 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 HIST1H3AP68431 136 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 PPP2R2BQ00005 443 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 POU4F2Q12837 409 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 APOFQ13790 326 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 MAD2L1BPQ15013 274 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 RCN1Q15293 331 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 MST1LQ2TV78 715 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 CCDC92Q53HC0 331 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 TEX30Q5JUR7 227 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 FAM209AQ5JX71 171 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF362Q5T0B9 420 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 HIST2H3PS2Q5TEC6 136 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 MBNL2Q5VZF2 373 aaKnown RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 KCTD18Q6PI47 426 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 DRAM2Q6UX65 266 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZBTB49Q6ZSB9 765 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 HIST2H3AQ71DI3 136 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 MRPL21Q7Z2W9 205 aaKnown RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 DPY19L4Q7Z388 723 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF101Q8IZC7 436 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 CBR4Q8N4T8 237 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF283Q8N7M2 679 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 TCEANCQ8N8B7 351 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF511Q8NB15 262 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF540Q8NDQ6 660 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF555Q8NEP9 628 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 WFDC11Q8NEX6 87 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 FAM81AQ8TBF8 368 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC25A40Q8TBP6 338 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMEM163Q8TC26 289 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 KLF14Q8TD94 323 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 THEM6Q8WUY1 208 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ASB17Q8WXJ9 295 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 FAM168AQ92567 244 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLAMF6Q96DU3 332 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZMYND19Q96E35 227 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF799Q96GE5 643 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 SORCS2Q96PQ0 1159 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 DIRC2Q96SL1 478 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 CNN2Q99439 309 aaKnown RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 DDOQ99489 341 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 DOK1Q99704 481 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR2J1Q9GZK6 312 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 EGLN1Q9GZT9 426 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 TPK1Q9H3S4 243 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 TOR3AQ9H497 397 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 OPA3Q9H6K4 179 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 WDR76Q9H967 626 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 DECR2Q9NUI1 292 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 DDX28Q9NUL7 540 aaKnown RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 MRPL22Q9NWU5 206 aaKnown RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 USE1Q9NZ43 259 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 LAMP5Q9UJQ1 280 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZDHHC8Q9ULC8 765 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 NOP16Q9Y3C1 178 aaKnown RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ABCA12Q86UK0 2595 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 FREM1Q5H8C1 2179 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 IGLV3-9A0A075B6K5 115 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 LOC390937A0A1W2PQ73 354 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 C17orf100A8MU93 164 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF670-ZNF695F2Z2N8 137 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 H7C1Q1 480 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 PHYHO14832 338 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 TBX1O43435 398 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 XRCC2O43543 280 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 PRKYO43930 277 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 MPZL2O60487 215 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 SELENOFO60613 162 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 NDUFS7O75251 213 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 NGFP01138 241 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 IGHV3-13P01766 116 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 HEXAP06865 529 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 ANXA2P07355 339 aaKnown RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 DBHP09172 617 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 ACSM4P0C7M7 580 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 NAT2P11245 290 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 DAOP14920 347 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 RAC2P15153 192 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 CFL1P23528 166 aaKnown RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 RPS27P42677 84 aaKnown RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 ERVS71-1P61550 626 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 TRIP10Q15642 601 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 SNCBQ16143 134 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 PCK2Q16822 640 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 TIGD6Q17RP2 521 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 ALKBH6Q3KRA9 238 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 LINC01590Q5TEZ4 76 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 NXNL2Q5VZ03 156 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 C12orf73Q69YU5 71 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 LYPD4Q6UWN0 246 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 PGAP1Q75T13 922 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms